Gavialis gangeticus (Gharial): 109296513
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Entry
109296513 CDS
T07453
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04110
Cell cycle
ggn04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109296513 (SMC1B)
04114 Oocyte meiosis
109296513 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109296513 (SMC1B)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109296513 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
109296513 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
109296513
NCBI-ProteinID:
XP_019371471
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All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MGFLKLLTMENFKSWRGHQSVGPFMRFTSVIGPNGSGKSNIIDALSFVMGERTANLRVKN
IQELIHGAHVGKPVSSAASVKMVYCEENGKEKTFARIIQGSSSEFLYNDKPVSRSVYTAE
LEKIGIIVKARNCLVFQGEVELIAMKKPKERTQLFEQISNSRGLTEEYEKKKKKMQQADQ
DTQFNFNQKKNAAAERKHAKLEKEEAERYQMLLGELKENRIQLQLFQLYHNEKKIEFLQN
KLDEKNTEIRSNKDSLSNAEDTFKAKKKVCGILNRDQQSTEKEMKTVEASLSQKRPRYIK
AKENTSHQIIKVDMAKKSLKDNEKQYGAQKEGIKEMEIELADIETAWATFKKKFEEEMVQ
RGTDIELEESQLDQYKQLKELVRKKVAILTQQLEKLQWEQKADQERMALDQRKQKEIEES
IKQVEEQIEDHKKRIEKVEEYTKACIDSLTEKRKQEETLTAEIENSGIRMTEVNEELNKL
YDELQNARIDYHEGKRQQMRAEILESLKRLYSDSVFGRLLDLCHPIHKKYQLAVTKVFGN
YMNAIVVTTEKIARDCIRFLKEERAEPETFLALDYLDIKPINEKLRELKGSKMMIDVVQT
PLASLKKVLQFVCGNSLVCETIKEAKQIAFDGPFRLKTVALDGTLFLKSGVISGGSSDLR
FKARRWDEKDINKMKEKRDNLANELKELMKIRRKESDLKHLQAQCQGTQTRLKYSQSELE
ILKKKHLANFYKEKSKLESELVNIKSECAMLNEGLAQRVRKMEEFQKKINEVEDSIFQEF
CEEIGVENIRVYEQEQVKQQEEIDRKRLEFENQKARLNIQLEFSHGQLQKQINKISALKE
AVNKDEAEIVNLKKDEEKCLLMLNEIMEEQRHLKDRLMTQKSEVTKAQSEIEEARKILLA
LNKEAGKLQREATAIEASLEQKRLERHNRLLECKVQDLRIDLLWGSLDEVSEIELGSEIE
STQTTADIYEREGAIQIDYSGLAEDLKDLQSDGEIEAHLKQLQQQAASKENILLRTAAPN
LRALKKLQIVKDKFEESVDAFEASRKEARLCRHEFEQVKKRRYELFSKCFEHVSVAIDQI
YKKLCRNSSAQAFLCPENPEEPYLGGISYNCVAPGKRFMPMDNLSGGEKTVAALALVFAI
HSFCPAPFLILDEVDAALDNTNIGKVSSFIKEQAQEQFQMIVISLKEEFYSRADALIGVC
PEQDDFMFSRVFTLDLTAYPDTEDNERRKKQRHSSTLD
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctgaagctgctaacgatggaaaacttcaagtcgtggcggggccaccagagc
gtcgggccctttatgcgcttcaccagcgttattgggcccaacggctcaggcaaatcaaac
ataatagatgctcttagttttgtgatgggtgaaagaacagctaacttacgagtgaaaaat
attcaagaacttattcatggcgcacatgttggaaaacccgtttcttctgctgcaagtgta
aaaatggtatattgtgaagagaatggaaaagaaaaaacatttgcgagaattattcaagga
agttcttcagaatttctttacaatgataaacctgttagccgatctgtatacacagctgag
cttgaaaaaataggcataattgtcaaagcaaggaactgcctggtttttcagggagaagta
gagttaattgcaatgaagaaacccaaagaaagaactcaactttttgaacaaattagtaat
tcacgggggctgactgaggaatatgagaaaaagaagaagaaaatgcagcaggcagaccag
gacacacagtttaattttaatcagaaaaaaaacgcagcagctgaacgcaagcatgcaaag
ttagaaaaagaagaggcagagcgttaccagatgctgcttggagagctgaaagaaaacagg
atacagctgcagctcttccaactttatcacaatgagaaaaaaattgaatttctgcagaat
aaattggatgaaaagaatacggagatacgtagcaacaaagactccctttctaatgctgaa
gatacctttaaagccaagaaaaaagtatgtggtatactaaatagagaccagcagagcaca
gaaaaagaaatgaagactgtggaagcatccttgtctcagaagaggccccgatacattaaa
gcaaaggagaatacttctcaccaaatcataaaagtagatatggctaaaaaatccttgaag
gacaatgagaaacagtatggtgcacaaaaggaaggcataaaagaaatggagatagagctg
gctgatattgagacagcatgggcaacatttaaaaagaaatttgaggaagagatggtacag
agaggaacagatattgaactggaagaaagtcagctggatcagtataaacagctaaaagaa
ctagtaagaaagaaagtagctatactgacgcagcagttagaaaaacttcagtgggaacaa
aaagcagatcaagaaagaatggcacttgaccagaggaagcaaaaagaaattgaggaaagt
ataaagcaagttgaggaacagatagaagatcacaaaaaaagaatagaaaaggtggaggag
tataccaaagcatgcattgactcgctaacagagaaaaggaagcaggaagaaaccctaact
gcagaaattgagaattcaggaattcgaatgacagaagtcaatgaagaactaaataaacta
tatgatgagctacaaaatgctagaatagattaccatgaaggaaagcgccagcaaatgaga
gcagagatcctggaaagtctcaaacgactctactctgattctgtgtttggaaggctgctt
gatttatgtcatcctattcataaaaagtatcagctggctgttactaaagtcttcggcaac
tacatgaatgccattgtcgtgaccactgaaaaaattgcaagggactgcattcgattccta
aaggaggaaagagctgagcctgaaacatttcttgctttggattacctggatattaagcca
atcaatgaaaagttaagggaattaaaaggatctaaaatgatgattgatgttgttcaaact
ccattggcttcactgaaaaaagtgcttcagtttgtatgtgggaacagcctggtctgtgaa
actattaaagaagcaaaacaaatagcatttgatggacctttccggttgaaaacagtagct
cttgatggaactctatttttgaaatctggagtgatttctggaggatcaagtgatttgaga
tttaaagctagacgttgggatgaaaaagacattaataaaatgaaagaaaagagagataac
ttggctaatgaactaaaggaattgatgaagatcagacgtaaggagtcagatttgaaacat
ttacaggctcagtgccaaggaactcagactcggctcaaatattcacaaagtgaattagag
attcttaaaaagaaacaccttgctaatttctataaggaaaagtctaaactggaaagtgaa
ttagtaaatattaaatcagaatgtgctatgctaaatgaaggacttgcacaaagagtaagg
aaaatggaagagtttcagaagaaaataaatgaggttgaagatagtatattccaggagttc
tgtgaagagattggggtagaaaatatacgtgtgtatgagcaagagcaagtgaaacagcag
gaggaaatcgataggaaaagactggaatttgaaaaccagaaggcacgattgaacattcag
cttgaatttagtcatggtcagcttcaaaaacagattaacaaaatcagtgcattgaaagag
gcagttaataaagatgaggctgagattgtcaacctgaagaaggatgaagaaaaatgtcta
ctaatgttgaatgaaataatggaagaacagcggcaccttaaggatagattaatgacccaa
aaatctgaggttacaaaagcacaaagtgaaattgaggaagccaggaagatattactagct
cttaataaagaagcagggaaattacaaagggaagctacagctattgaagcctctctggaa
cagaaaagattagagagacataataggcttcttgaatgcaaggtccaggacttgagaatt
gatctcctgtggggatcactggatgaagtcagtgaaattgagctaggatcagaaatagaa
agcactcagacgacagcagatatctatgaaagagaaggtgcaattcagatagactacagc
ggtctagcagaagatctaaaggacctacagtctgatggagagattgaggctcatctgaaa
caactgcagcagcaagcagcatcaaaagagaatattttgttaaggacagctgcaccaaac
ctaagagcactgaagaaattgcagattgtgaaggacaagtttgaagaatcagtagatgca
tttgaagccagtagaaaagaagccaggctatgtaggcatgaatttgaacaggtgaaaaaa
aggagatacgaacttttcagcaaatgttttgagcatgtctcagtagctattgatcagatc
tacaagaaactctgcagaaacagtagtgctcaggcattcctttgtcctgagaatcctgag
gagccttacctaggtggtattagctataactgtgtggctcctggaaaacgctttatgcca
atggacaacttgtctggaggtgaaaaaaccgtggcagcattggctctcgtgtttgctata
cacagtttctgcccagccccttttcttattttggatgaggtagatgcagcactggataat
acaaacattgggaaagtatcaagcttcattaaggagcaggcacaggaacaatttcagatg
atagttatttctctaaaggaagaattttattccagagcagatgcattaattggagtctgt
ccagagcaagatgacttcatgtttagtcgggtgttcacactagatctcactgcatatcca
gatactgaggacaatgaaagaagaaagaaacagagacacagctccacactggactaa
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