Gavialis gangeticus (Gharial): 109296562
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Entry
109296562 CDS
T07453
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109296562 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109296562 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109296562 (CPSF4L)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109296562 (CPSF4L)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109296562 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_3
zf-CCHC
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
109296562
NCBI-ProteinID:
XP_019371552
LinkDB
All DBs
Position
Unknown
AA seq
261 aa
AA seq
DB search
MQELVARVEKLTFKLEMDVMQQRGALPLPFPGMDKSGAAVCEFFLHGLCGKGLTCPFRHV
CGEKSVVCKHWLRGLCKKGDHCEFLHEYDVTKMPECYFYSKFGECSNKECPFLHLDSASR
AKDCPWYDEGFCKHGPLCRYKHTRRVVCTNYLAGFCPNGPRCKFVHPKANLMLDSLERSK
GLPMTTDGVGGRKPSLPEAQLFPCPSRGSSAQHPAKKAPGTSGYPYGSLRPLEQVTCFKC
GEKGHYANKCGKGRLGMLLGK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaactcgtggccagggtggagaagctcacgttcaagttggagatggatgtgatg
cagcagagaggggccctgccgctgcccttcccgggcatggacaagtcgggggcagccgtg
tgcgagttcttcctccacggactgtgcggaaagggcctgacgtgccccttccggcacgtg
tgcggggagaagtcggtggtgtgcaagcattggctgcggggactctgcaagaagggggac
cactgcgagttcctgcacgagtacgacgtcaccaagatgcccgagtgctacttctactcc
aagttcggtgagtgcagcaacaaggagtgccccttcctgcacctcgactcggcttccagg
gcgaaggactgtccttggtacgacgaggggttctgcaaacacggtcccttgtgccgatac
aagcacacccggagggtcgtgtgcaccaactacctggctggcttctgccccaatggccct
cggtgcaaattcgtgcaccccaaggccaacttgatgctggacagcttggagcgctccaag
gggcttcccatgacaacagatggagttggtggtcgcaagccgtccctcccagaagcccag
ctgttcccttgcccttcccggggcagcagtgcccagcacccagccaagaaagcaccaggg
accagcggctacccctatggatccctgcggcccctcgagcaagtgacgtgcttcaagtgt
ggggagaagggtcactacgccaataaatgcggcaagggtcgtctggggatgctgctgggg
aagtga
DBGET
integrated database retrieval system
