Gavialis gangeticus (Gharial): 109296618
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Entry
109296618 CDS
T07453
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ggn03037
]
109296618 (NPHP1)
Cilium and associated proteins [BR:
ggn03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
109296618 (NPHP1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
109296618
NCBI-ProteinID:
XP_019371636
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All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAGLGRGSRGRGRGPLQRVQRRSRELREQVDALLAESRQRGALGPGDSKGLYPRCVELKK
LVNENMHTLNNLTKADEPAPVGNYNQRKGEEEKELLKLTQQLQKLAAVFSHESLSKDYTI
GRECESGHHIEQENEEEDDDDEEESSEEEDEVEDDEFENQPTVKECITVGDFDAQQEGDL
SFKKSEVLLILDKKPDGWWMAENSKGERGLVPKTYLAVYKKEGLGQEPSEEETDDDIEVV
DETADGTKIKERTDSHWSALRKAIRENDAIDVLATMGAVPSGFRPSTLSQLFEEGNEFRA
SYFLQPELTTSQLAFKDLVWNPEKGTIQPRPTRISLIITLWSCKMIPLPGVSIQVLSRHV
RLCLFDGNRVLSNIHTVRAMWQPKNPKSWTFSPRVTGILPSLLDGDCFVRSNSSSPDIGI
LFELGITYIRNSTGERGELSCGWAFLKLFDSSGIPVSSKTLELLLNGGTPYERGVEVDPS
MSRRASDSIFHQMITLKKQPQLFVKLRSLSTQSKDILNLLPETLIGSMCCIHLLILYRQI
LGDVLLKDRISAQSADLISNPILATFPKLMEQPDLMDAFRSAWAEKESTLKRSEKRDREF
LKTVFTLVYHDSVFPLLQSTFLPKHKWADEESEASRWKVIADFLKQTRENDGALYSLLSS
ETVHKAFDISEVAYDFLGEARKSSVST
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctgggccggggtagccggggccggggccggggcccgctgcaacgcgtgcag
cgccggagccgcgaactgcgggagcaggtggacgcgttgctggcagagagcaggcagcgc
ggggccctcggccccggggacagcaagggactgtacccgagatgtgtggaactgaagaaa
ctggtgaatgaaaatatgcatacccttaacaacttgacaaaagctgatgaacctgcccct
gtaggaaattataaccagaggaaaggagaggaagaaaaagaattgttaaaactcactcaa
cagctgcaaaaacttgctgcggtcttcagtcatgaaagtttatctaaggattacactatc
ggtagagaatgtgaaagcggtcatcacatagaacaggaaaatgaggaagaggatgacgat
gatgaagaagaaagtagtgaggaggaagatgaggtggaagatgatgaattcgaaaatcag
ccaactgttaaagaatgtatcactgttggtgattttgatgctcaacaggaaggcgatctc
tcatttaagaaaagtgaagttttgctcatccttgacaaaaagcctgatggttggtggatg
gcagaaaattccaaaggagagagaggccttgttcctaaaacctatctcgctgtgtacaag
aaagagggactagggcaagagccaagtgaagaggaaactgacgatgacattgaggtagta
gatgaaacagcagatggaaccaaaattaaagaaagaactgattctcactggagtgctctt
agaaaagctatcagagagaacgatgccattgatgtattggcaaccatgggggctgttcct
tcagggttccgaccatcaacactatcccagttgtttgaagaagggaatgagtttcgagcc
agttacttcctacagcctgaacttactacttcccaactggctttcaaagacttagtgtgg
aaccctgaaaagggcacgattcaaccaagaccaactcgaatatcattgattataacttta
tggagctgtaaaatgattcctcttcctggagtgagcatacaggttctcagcagacatgtc
cgactctgtctttttgatggtaacagggtactgagtaacattcatacagttagagcaatg
tggcaacctaaaaatcctaaatcatggactttttccccacgggtaacaggcattttaccc
agtttgcttgatggcgactgtttcgtcaggtccaactcttcatctccagacattggtata
ttatttgaacttggcatcacttatatacgcaattcaactggtgaaagaggagagttaagc
tgtggttgggcatttttaaaactatttgactcaagtggaattccagtttcttccaaaact
ttagagctacttttgaatggtggtactccctatgagagaggtgttgaggtggacccttcc
atgtcaagaagagcaagtgatagtatatttcatcagatgataacactgaagaaacagcct
caactttttgtgaaactgcggtcactaagcacacaatctaaagatatcctcaatctgcta
ccagaaacattgattggcagcatgtgctgcattcacctcttgatactttatcgacaaatt
cttggtgatgtgctcctgaaggacagaataagcgcgcagagtgctgatttaattagtaat
cctattttagcaacttttcccaagcttatggagcagcctgatcttatggatgcatttagg
agcgcttgggcagaaaaagagagcacattaaagagatcagagaagagagatcgagaattt
ttgaagaccgtatttaccctggtgtaccatgactctgtcttccctcttctccagtctact
ttcctcccaaagcataaatgggcagatgaagagtcagaagcctctcgctggaaagtgatt
gctgacttcttgaagcagacccgagaaaatgatggtgctctctattctctgctgtcctca
gaaactgttcacaaagcttttgatatttcagaggtagcatatgattttctaggagaggca
aggaaaagtagtgtatcaacatga
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