Gavialis gangeticus (Gharial): 109296679
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Entry
109296679 CDS
T07453
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03013
Nucleocytoplasmic transport
ggn03015
mRNA surveillance pathway
ggn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109296679 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
109296679 (EIF4A3)
03015 mRNA surveillance pathway
109296679 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109296679 (EIF4A3)
03041 Spliceosome [BR:
ggn03041
]
109296679 (EIF4A3)
03009 Ribosome biogenesis [BR:
ggn03009
]
109296679 (EIF4A3)
03012 Translation factors [BR:
ggn03012
]
109296679 (EIF4A3)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109296679 (EIF4A3)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109296679 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
109296679 (EIF4A3)
Spliceosome [BR:
ggn03041
]
Complex C
Other components
EJC/TREX
109296679 (EIF4A3)
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
90S particles
Helicases
109296679 (EIF4A3)
Translation factors [BR:
ggn03012
]
Eukaryotic type
Initiation factors
eIF-4
109296679 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
109296679
NCBI-ProteinID:
XP_019371717
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MRQRWEAGNGVRSVRLDVATHARTYVREAARPGRSVQAAVGAATMSGAAGVAGSARKRLM
KEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDV
IAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCH
ACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFK
EQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV
EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES
IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAI
NFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagcgctgggaggcggggaacggcgtacgctccgtgcggcttgacgtcgctaca
cacgcacgcacgtacgtacgtgaggcggccaggcccggtcggagcgtccaggccgctgtt
ggggcggccaccatgtcgggggcggcgggcgtagcgggctcggcccgcaagcggctgatg
aaggaggaggacatgaccaaggtggagttcgagaccagcgaggaggtggacgtcacgccg
accttcgacaccatggggctgcgcgaggacctgctgcgcggcatctacgcctacggtttt
gagaagccatcggcaatccaacagagagcaatcaaacagatcattaaaggaagagatgtg
attgcacagtcacagtctggaacaggaaaaacggcaacattttgtatctcggttctgcag
tgtctggatattcaggttcgggaaacccaggcattgattcttgcaccaacaagggagctg
gctgtacaaatacagaagggtcttcttgctctgggtgactacatgaatgtccagtgtcat
gcctgtatcggagggactaatgttggtgaagacattcgaaaactggattacgggcagcat
gtcgttgctgggaccccaggccgtgtgtttgatatgatccgtcgccgaagtttgaggacg
cgggctatcaaaatgttggttttggatgaagcggatgagatgctcaataaaggcttcaag
gagcagatttacgatgtgtaccggtacctgcctccagctacacaggtggttcttatcagt
gctaccttgccgcatgagatcctggagatgaccaataagttcatgacggaccctattcgt
atcctagttaaacgtgatgaactgactctagaaggaatcaagcagttttttgtcgccgtg
gagagggaagaatggaagtttgacacactatgtgatctgtatgatacgcttaccatcaca
caagctgtcatcttttgtaataccaaaaggaaggtggactggctaacggagaagatgaga
gaagcgaatttcacagtctcatccatgcatggagacatgccacagaaagagagagaatcc
attatgaaggagttcagatctggtgccagccgagttcttatatctacagacgtttgggcc
cggggcctggatgttcctcaggtgtccttgatcattaactacgacttgcctaataacaga
gaactctatatacacagaattggcagatcaggtcggtatggccgcaaaggcgtggccatc
aactttgtgaagaatgatgacattcgtatcctgcgtgacattgagcagtactactccacc
cagatagatgaaatgcccatgaatgttgctgatctcatttaa
DBGET
integrated database retrieval system
