Gavialis gangeticus (Gharial): 109296752
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Entry
109296752 CDS
T07453
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109296752 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109296752 (MSH6)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109296752 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
WPP
Motif
Other DBs
NCBI-GeneID:
109296752
NCBI-ProteinID:
XP_019371850
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MFYSSKPEIKRAMILADDAMPKDASKRLELAVCNEPSDTEDEEMEVSESASGNSEDYESD
EEVKKNKQTTSQRRSAGKSKKRRVFDSDTDNEGSDVEFKPDAKNEASSDEGSSGVDEGES
GDSEPDTEMDIESPVKVASKRKRLAINRPAKRRSLENDLPEAPKRVAAVSLETKSKLTSF
AAPESFESQPNTGSGGVGSSVEWEHDKFEWLHEGKRRDGCRRRQGDPSYDPCTLYVPEDH
LNKCTPGMRRWWQLKSQNFDSVIFYKVGKFYELYHMDAVTAVNELGLIFMKGTWAHSGFP
EIAFGRFSDVLVQKGYKVVRVEQTETPEMMEARCKSLAHPTKFDKVVRREICRVITKGTQ
TYSVLDGDPSENHNRYLLCIKEKVEDSSGHLRVYGVCFVDTSVGKFYVGQFPDDRHCSRF
RTLVSHYTPVQILFEKGNLSSDTYKILRGSLSSCMQEGLISGSQFWSASKTLKTLLEEGY
FKDKENSDDECTLPPVIKSMTSESDSLGLTPGDNSELALSALGGCVFYLKKCLIDQELLS
LVNFEEYIPVDIDVTKATGSSSFFAKTSQRMVLDGVTLMNLEILQNGTTGTMEGTLLERM
DTCCTPFGKRLLKQWICAPLCNPYAINDRLDAVEDLLAVPTKMSEVSEQLKKLPDLERLL
SKIHSIGSPLKSESHPDSRAIFYEETKYSKKKIADFLSALEGFKAMNEIIDMMEETADDF
KSKILKQVVTRKSKTPEGRFPDLHAELKRWDTAFDHNQARKTGVITPKSGFDPDYDKALQ
DIKDLEEDLREYLNKQRKLLGFKTMLYWGAGKNRYQIEIPESVVTRGLPEEYELKSTRKG
YKRYWTKEIEKMLADMVNAEERRDAAVKDCMRRLFYNFDKNNKDWQTAVECFAVLDVLLC
FANYSRDGEGPMCRPVILLPENNVLPFLELKGSCHPCITKTFFGDDFIPNNIVIGCKDED
EESTSEAYCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYLPAEACRLTPVDRVFTRLGAS
DRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAENIK
CRTLFSTHYHSLVEDHSHNDAVRLGHMACMVENESEDPSQETITFLYKFTKGACPKSYGF
NAARLANIPEEIIQNGHRKARDFEKMTLSLRMFRYLCLMAEDATGDKSTVQKLMRLINHL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgttttacagttcaaagcctgaaattaaaagagcaatgatcttagcagatgacgctatg
cctaaagatgcaagtaagcggcttgagcttgctgtgtgcaatgaaccttcagacacggaa
gatgaggaaatggaggtgagtgaaagtgcatcaggcaacagtgaggattatgagagtgat
gaggaagtgaaaaaaaataagcaaacaactagccagagaagaagtgctggaaaatccaag
aagagaagagtgtttgactctgacactgataatgaaggttcagatgtggagtttaagcca
gacgctaaaaatgaagcaagcagcgatgaaggcagcagtggagtggatgaaggtgaatct
ggagactctgagccagacacagagatggatatagaaagtcctgttaaagttgcctctaaa
cgaaagagactagccataaacagaccagctaaaaggaggagcttggagaatgaccttccc
gaggcacccaaaagagtggcagccgtttctttagaaaccaagtccaagctgacatctttt
gcagcacctgaaagcttcgagtctcagccaaatacaggcagtggaggagttggcagttct
gtggaatgggaacacgataagtttgaatggctccatgaaggaaaaaggagagatggatgc
aggaggcggcagggtgaccctagttatgacccatgcaccctctatgtgccagaggatcac
ctaaacaaatgtacccccggaatgcgaaggtggtggcagctcaagagtcagaactttgac
tctgtgattttctacaaagttggcaagttctatgagttgtatcacatggatgctgtaact
gcggtgaacgagcttggactgatatttatgaagggtacatgggcccattcagggttccca
gaaattgcgtttggcaggttctctgatgttctagttcagaaggggtacaaagtagtccgg
gttgagcagacagagacacctgaaatgatggaggcacgctgcaaatccctggctcaccca
acaaagtttgacaaggttgtacgaagagaaatatgtcgggtaattactaaagggacgcag
acttacagtgttctggatggtgatccatctgaaaaccataacaggtatcttctgtgtata
aaagagaaagttgaagactcttctggccatctgcgtgtatatggtgtctgttttgttgac
acttctgttggcaaattttatgttgggcagtttccagatgaccgccactgttcaaggttc
agaactttggtgtcacattatactcctgtgcagatcctgtttgagaagggaaacctctct
tcagacacgtacaaaatactgagaggctcactgtcttcttgcatgcaagaaggtttgatc
tcaggctcccaattctggagtgcttctaaaacactaaaaactctgcttgaggagggatac
ttcaaggataaggaaaattctgatgatgaatgtactttgcctcctgtgatcaaatccatg
acttcagaaagcgactctctgggacttactcctggtgacaacagtgaattagctctgtca
gctcttggcggctgtgtcttctaccttaagaagtgccttattgatcaggagctcttatct
ctggtaaactttgaggaatacattcctgtggacattgatgtgaccaaagctaccggatca
agtagtttctttgcgaaaactagtcagaggatggtactggatggggtgactctaatgaac
ttggaaatcctccagaatggaaccactggcaccatggaaggaacgttactggaaaggatg
gacacctgttgcacgccctttggaaagcgactcctgaaacagtggatctgtgcgccactc
tgtaatccttatgctatcaatgatcgtttagatgcggttgaagaccttctggcagtgcct
actaaaatgtctgaagttagtgaacaactaaagaaactcccagacctggaaaggcttctg
agtaaaattcacagtattggatctccactgaaaagtgagagtcatccagacagtcgggcc
atcttttatgaggaaaccaagtacagcaaaaaaaaaattgctgactttctgtctgcactg
gaagggtttaaggcaatgaatgagatcatagacatgatggaagaaactgctgatgatttc
aaatccaaaatacttaaacaagtagtgacccgcaagtctaaaactccagagggccgcttt
ccagacctccacgcagagcttaaaagatgggacactgcttttgaccataatcaggctcga
aaaactggggtgatcacaccaaagtctgggtttgaccctgattatgataaggccttgcag
gatataaaagacctggaagaggatcttcgggaatatttgaataagcagcgcaagctactt
ggattcaaaactatgctgtactggggggcaggcaagaatagatatcaaatagaaattcca
gaaagcgtagtgacacgtggcttgcctgaggagtatgaattgaagtccaccagaaagggt
tacaaacgctactggaccaaggagatcgagaagatgctggctgacatggtcaacgctgag
gagcggagagatgcggctgtgaaagattgcatgaggcgactcttctacaactttgataaa
aacaataaagactggcaaacagcagtggaatgttttgctgtcctagatgtcctgctgtgc
tttgctaattatagtcgagatggtgaaggaccaatgtgtcgacctgtgattctgctgcca
gagaacaatgttctgcccttcttggagcttaaaggttcctgccatccatgcattacaaaa
actttttttggggatgattttattcccaataatattgtgataggctgcaaggatgaagat
gaagagagcactagtgaagcctactgtgttctagtaactggcccaaatatgggtggcaaa
tctacacttatgagacaggctggcctcctggtaataatggctcagttgggatgttactta
cctgccgaagcttgcaggcttactcctgttgacagagtgtttacgcgactaggtgcctct
gacagaattatgtcaggagaaagcaccttttttgttgagctgagcgagacttccagcata
ctccagcatgcaacagagcattcccttgtgcttgtggatgaactaggtagaggcacagct
acttttgatggaacagcaatagcaagtgcagttgttaaagaacttgcagaaaatataaag
tgccgcacattgttttcgacacactaccattcgttagtagaagaccattcacacaacgat
gctgtacggctaggacacatggcatgtatggttgaaaatgagagtgaagatccaagccag
gaaactattacatttctgtataaattcactaagggagcttgtcctaaaagctatggtttt
aatgcagcaaggcttgctaacattccagaggaaattattcagaatggtcacagaaaagca
agagactttgagaagatgacgctttcacttaggatgtttaggtacctttgcttgatggca
gaggatgcaacaggagataaaagcactgttcagaaactgatgagactgatcaatcatctt
taa
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