Gavialis gangeticus (Gharial): 109296950
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Entry
109296950 CDS
T07453
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggn01009
]
109296950 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109296950 (VPS54)
Protein phosphatases and associated proteins [BR:
ggn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109296950 (VPS54)
Membrane trafficking [BR:
ggn04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
109296950 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
109296950
NCBI-ProteinID:
XP_019372140
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MASSHSSSPVPQSNSSDAFFKKEMDSAKCFQPVQSLPDVCPKEPTGDPNSLCDSPSLVAD
QHRWTIFHSKVNLPAALNDPRLAKRESDFFTKTWGQDFVDTEVTPSFYLPQINKELFASY
QQEITQREKIHERCKNICPPKDTFDRTLLHIHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSHAVKMLRDKISQIDKVMCEGSLRVLRLSLTRNNCIKACNKLKLMATVHQTQ
PTVQLLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARSDLNRPLEDDCQILEEERLISLVFGLLKQRKLNFYEIYGDEMIITAKNIIKQCVVST
VSQIEEIDIQVVIKLADQMRMMNFPQWFDLLKSIFSKFTIFLKRIKATLNVIRSVVLLVL
DKNQKTREQEETSLQKNSTKDTIVDTEVAYLTHDGMFISDAFGERDIPSVAVDTTSQRNV
SPNSEPSSSDSVSEPECTTDSSSSKEQTSSSVTPGGVEIIISDDMKLTDLELGKLANNIQ
ELLYSASDICHDRSVKFLMARAKDGFLEKLNSNEFVALSRLMEGFILDTEQICGRKSMSL
RGALQSQANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVAEGRITLPEKKA
VAEERKPADFLIVEGQKYTVVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFN
SRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPTIRAHFEARLQHKQFSVLR
HFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAI
YDLLPEEQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPQNGLVTSDVAFYTGNLQALKG
LKNLDLNMAEIWEQKK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagtcaaacagcagtgatgcgttcttt
aaaaaggaaatggattctgctaaatgctttcaacctgtacagtcactgccagatgtatgt
cccaaggaacctacaggtgatcctaatagtttatgtgacagcccatctctagttgcagat
cagcatcgatggactatttttcattccaaagtaaacctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggacaggactttgtggac
acagaagtcacgccttcattctacctcccacagattaacaaggaactttttgcatcatac
caacaggagatcacgcagagagagaagattcatgaaagatgcaagaatatttgtcctcct
aaagatacctttgacaggactctcttacatattcatgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagactttgccttggaagattccttaacatttaat
gccgttttaccatggtctcattttagtactgctggaggaaaaggaaatcgtgatgcagct
tcctctaagttgcttcaagaaaagctgagccattatctggatattgtagaggtaaatatt
gctcatcaaatttctctacgctcagaagcattttttcatgcaatgacctctcagcatgaa
ctgcaggactacctcaggaaaacctcccacgctgtaaaaatgcttcgagataaaatctcc
caaattgataaagttatgtgcgagggatcacttcgagttttgagactctcacttacccga
aataactgtataaaagcatgcaacaaactgaaactaatggcgactgtacaccaaacacaa
cctactgtacagctgttgctgtccacatctgaatttgttggagcactggatttaatagca
acaacacaggaagttctacagcaggaacttcaaggcattcacagtttccggcatcttgga
tcacagctttgtgaattagaaaaactgattgacaaaatgatgattgcagagttttctact
tacgctcgcagtgatttaaatagaccactagaagatgattgtcaaattctagaagaggaa
aggctcatatcactagtatttggacttttaaaacaaagaaaactaaatttttatgaaata
tatggtgatgaaatgatcattacagcaaagaatataattaaacagtgtgttgttagcaca
gtatcgcaaatagaagaaatagatatacaagttgtcattaaacttgcagaccaaatgaga
atgatgaattttcctcagtggtttgatctactgaagagtattttttctaaatttactatc
ttcctcaaaagaattaaggcaacattaaatgttattcgtagcgtggttcttttggttcta
gacaagaaccaaaagaccagggagcaggaggaaacttcattgcagaagaactctacaaaa
gacactattgtggacacagaagtggcttatttgactcatgatggcatgtttatcagtgat
gcattcggtgagagagatatcccatctgtagcagttgacactacctctcaaagaaatgtt
tccccaaatagtgagccttccagcagtgattcagtctctgaaccggaatgcactactgac
tcctcatccagcaaagagcagacatcgtcttctgttacaccaggaggagtggaaattatc
atcagtgatgacatgaagctgactgatctggaactgggcaagctggcaaataacattcaa
gagttgctttatagtgcctctgatatctgccatgatcgatctgtcaagttcctcatggca
agggcaaaggatggcttcctggagaagctgaattctaatgaatttgttgccctttctcga
ctaatggaaggatttatcttagacaccgaacaaatctgtggccgaaaaagcatgtcattg
cgcggcgcgcttcagagtcaagctaatagatttgtgaatagattccacgaggagagaaaa
acaaagctcagtctgctactagataatgagcgctggaagcaagctgaagttcctgctgag
tttcaggatcttgttgattctgtagctgaaggcaggattactctacctgaaaaaaaagca
gttgctgaagaaagaaagccagctgacttcctcattgtcgaaggacaaaaatatactgtg
gttggaacagtgttgctgttaataagaataatccttgagtactgccagtgtgtggataac
atcccatctatcactactgacatgcttactcgtctgtctgatttactaaagtatttcaac
tccagaagctgccaactagtgcttggagcaggtgcattgcaagttgttggtctgaaaaca
ataactacaaagaatttagctctctcctcacgttgcctacagttaatagtacactacatt
cccactatccgggctcatttcgaagctcgactgcagcataagcagttcagcgtgctcagg
cattttgaccacatcactaaggattatcatgaccacatagctgaaatttcagcaaagctt
gtagccataatggatagcttatttgacaaactcttatccaagtatgaagtgaaagctcct
gttccttcagcctgcttcaggaatatttgtaagcaaatggcaaagatgcatgaagctata
tatgacctccttcctgaggaacaaacccagatgttatttttaagaattaatgcaagctac
aaacttcatttgaagaggcagctagcccacctaaatgtagtcaatgatggaggacctcag
aatggactggttacatcagatgtagctttttacactggaaaccttcaagctttgaaaggc
cttaagaatctagatctaaacatggctgaaatctgggagcagaagaagtga
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