Gavialis gangeticus (Gharial): 109296972
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Entry
109296972 CDS
T07453
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109296972 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ggn03041
]
109296972 (DDX5)
03009 Ribosome biogenesis [BR:
ggn03009
]
109296972 (DDX5)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109296972 (DDX5)
Spliceosome [BR:
ggn03041
]
Complex A
U1 snRNP components
U1 related factors
109296972 (DDX5)
Complex B
109296972 (DDX5)
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
Pre-60S particles
Helicases
109296972 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
109296972
NCBI-ProteinID:
XP_019372181
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGLLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRASKEITVKGHTCPKPLINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFNSFSRERENFERTYGAVGKRDFGAKAQNGAYSAQSFSNGTPFGNG
FAAAGMQASFRAGNPAAGAYQNGYDQQYGSNMANMHNGMNQQQYAYPATGTAPMIGYPMP
ASYSQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtactccagcgaccgggaccgagggtttggagcccctcggtttggtgggagt
cgaggcggtctcctctccgggaagaaatttggaaaccctggggagaagcttaccaaaaag
aaatggaacttggatgagctgcccaaatttgagaagaatttttatcaagagcatcctgat
gtagttcggcgtactgcacaagaggttgaacaatacagagcaagcaaagaaattacagtt
aagggccatacctgtccaaaaccactcataaacttttatgaagctaactttcctgcaaat
gttatggaggtaattcagaggcagaactttactgaaccaactgctatccaagcccaggga
tggcctgttgccttgagtggtttggatatggttggagtagcacagactggatcggggaaa
acgctatcttacctgttgcctgccatagtgcacataaatcatcagccattcctagagcgg
ggagatggacctatttgtctggtgctggcaccaactcgagaactggctcaacaagtgcag
caagtagctgctgagtatagtagagcatgtcgtttgaagtccacgtgtatttatgggggt
gctccaaaaggaccacagatccgtgacttggaaagaggtgtggaaatttgcattgccacg
cctggaagactcatagacttcttagaagctggaaagactaatctcaggaggtgcacttac
cttgtgcttgatgaagctgacagaatgcttgacatgggatttgaacctcagatcagaaaa
attgtagaccagataagacctgataggcaaaccctgatgtggagcgcaacatggcccaaa
gaagtcaggcagcttgctgaagactttttgaaggaatatgtacatattaacattggggca
ctggagctaagcgcaaaccacaacattcttcaaattgtagatgtatgtcacgatgtagag
aaagatgacaaacttattcgattaatggaagaaatcatgagtgagaaggagaacaaaacc
attgtgtttgtggaaaccaaaagacggtgtgatgaccttaccagaaaaatgaggagagat
gggtggccagcaatgggtattcatggtgataagagtcagcaggagcgggattgggttcta
aatgaattcaaacatggaaaagctccgatcctgattgccacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattt
tttactcctaataatataaagcaagtaaacgacctcatctctgtgcttcgcgaggctaat
caagctatcaaccccaaattgcttcagttgattgaagacagaggttcaggtcgttcccgg
ggtgatcgacgtgacagatattctgcgggcaaaaggggtggatttaatagttttagtaga
gaaagggagaacttcgaaagaacatatggtgcagtaggaaagagagacttcggagcaaaa
gctcaaaacggggcctacagtgctcaaagctttagtaatggaactccatttggaaacggt
tttgcagctgctggcatgcaggccagcttcagggctggtaatcctgctgctggagcatac
caaaatggctatgatcaacaatatggaagtaacatggcaaatatgcacaatggcatgaac
caacagcagtatgcgtatcctgccactggtactgctcccatgataggctacccaatgcca
gcaagttattctcaataa
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