Gavialis gangeticus (Gharial): 109296990
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Entry
109296990 CDS
T07453
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109296990 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109296990 (PNPT1)
03016 Transfer RNA biogenesis [BR:
ggn03016
]
109296990 (PNPT1)
Enzymes [BR:
ggn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
109296990 (PNPT1)
Messenger RNA biogenesis [BR:
ggn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
109296990 (PNPT1)
Transfer RNA biogenesis [BR:
ggn03016
]
Prokaryotic type
tRNA degradation factors
109296990 (PNPT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Phos_pyr_kin
Motif
Other DBs
NCBI-GeneID:
109296990
NCBI-ProteinID:
XP_019372212
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MAACTGCRCAGLRARYSWRHPFLGAVRRWLGPGSRMAPLLQARGFGGDQAVAVDLQGRKL
EISSGKLARFADGCAVVQLGDTSVMVTAVSKTKSSVSQFMPLVVDYRQKAAAAGRIPTNY
LRRELGTTDKEILTSRVIDRSIRPLFPEGYYYDTQIICNILAVDGINDPDVLAINGASAA
LALSDIPWNGPIGAVRVGIVDGQLVINPTRKEMSSSLLNLVVAGGPQSQIVMLEAAADNV
LQQDLCHAIKIGLKHTQQIIQSIQHMVKKQGTGKRAVETVFVAPAEIVEYAKELASDKLR
EVFKDFNHDKISRDEEINKIRLKTEEQLREKFPEAEPYAIMESFSVVSKDVFRTLVLNNY
IRCDGRDLTSLRNISCEVNMFNMLHGSALFQRGQTQVLCTVTFDSLESSMKSDVITTAMS
GIKDKNFMLHYEFPPYATNDIGRVTGMNRRELGHGALAERALKPVIPQDFPFTIRVTSEV
LESNGSSSMASVCGGSLALMDAGVPISSAVAGVAIGLISKTNLSNNREIEDYRLLTDILG
IEDYYGDMDFKMAGTNKGITALQADVKLPGIPVKIVMEAIQQATVAKREILKIMNETIAK
PRPTRKQNGPVVETVHVPVSKRSRFVGPAGYNLKKLQAETGITLSQLDEETYSVFAPTPN
AMDEAREFISAICQDDQEVRLEFGAVYVATIVEIRDIGVMVKLYPNMTPVLLHNTQLDQR
KINHPSALGLQVGQEIKVKYFGRDPSDGRMRLSHKVLQFPATPVVKTLTDKNSIVMSGTS
PQSSSSSS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttgcacgggttgccgctgtgccgggctgcgggctcggtacagctggcgccac
ccgtttctcggcgctgtgcggcgctggctaggcccgggctcccgcatggcgccgctcctc
caggcccggggctttggcggtgaccaggcggtggccgtggacttgcagggcagaaaactg
gaaatttcctctggaaaactagcaagatttgctgatggatgtgctgtagtgcagttaggt
gacacatcagtgatggttacagcagtcagtaaaacaaaatcttctgtatcccagttcatg
cccctggtggttgattatcgtcaaaaagctgctgcagcaggaaggattcccacaaactac
cttaggagagagcttggtactactgataaagaaattcttacaagcagagtgatagatcgg
tcaattaggccactcttcccagaaggctactactatgatacacagatcatttgtaatatt
ttagcagtagatggtatcaatgaccctgatgtcctggcaattaatggagcatctgcagca
cttgcattatcagatattccttggaatggtccaattggtgcagtacgggtaggaattgtt
gatgggcagcttgttattaacccaactagaaaagaaatgtcatctagtctgttgaactta
gtggttgctggaggccctcaaagtcagatagtcatgttggaagcagcagctgacaatgta
ctgcagcaggacttgtgccatgccatcaaaattgggttgaagcatacccagcaaataatt
caaagtatccaacacatggtgaaaaaacagggaactggcaagagagctgttgagactgta
tttgttgctccagcagaaattgtggaatatgcaaaagaacttgcatctgataagctacgt
gaagtgtttaaagattttaaccatgacaaaatttctcgagatgaagaaattaacaagata
agacttaaaacagaagaacagctgagagaaaaatttccagaggctgagccttatgcaatt
atggaatccttcagtgttgtttcaaaggatgtttttaggacccttgttctgaataactac
ataaggtgtgatggtagagacctgacttctctcagaaatatcagctgtgaagtgaacatg
tttaatatgctccatgggtctgcattatttcagagaggtcaaactcaggttctctgtacg
gttacatttgattcattagaatctagtatgaaatccgatgtcatcacaacagctatgagt
ggaataaaagataaaaactttatgctgcattatgagtttcctccttatgcaactaatgac
attggcagagttactggtatgaacagaagagaacttggacacggtgctcttgcagagaga
gctttgaagccagttattccccaagatttcccattcacaataagagttacttcagaagtc
ttggaatcaaatggatcctcttcaatggcttctgtatgtggtggaagtttggccttaatg
gatgcaggagttccaatatccagtgctgtggcaggtgttgcaataggtctcatttccaaa
actaatctttcgaataatagagaaattgaggattatcgtttgctgacagacatcctggga
attgaagattactatggcgatatggatttcaaaatggctggtactaataaaggaataact
gctttgcaggctgatgtaaaactacctgggataccagtaaaaattgtaatggaagccatc
caacaggccacagttgcaaagagagaaatcttgaaaattatgaacgaaacaattgcaaaa
cccagaccaacaagaaaacaaaatggaccagttgtagaaactgttcatgtcccagtgtca
aaaagatcaagatttgttggcccagctggttataatttaaaaaagctgcaggctgaaact
ggtataactttaagtcaattggatgaagagacctattctgtgtttgctccaacacctaat
gctatggatgaagcacgagagtttatcagtgctatttgccaagatgatcaggaggttcgt
ttggaatttggagctgtctatgtagccacaatagttgaaattagggatattggagtgatg
gtaaaactgtatccaaacatgactccagtactactacacaatacacaacttgatcaaaga
aagattaaccatcccagtgctctaggattacaggttggccaggaaattaaggtgaaatat
tttggacgtgatccaagtgatggtagaatgagactttcccacaaagtacttcagttccca
gcgacacctgtggtgaaaaccctaactgacaaaaacagtattgtaatgagtggtacaagt
ccacagtcctctagctcatcatcctaa
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