Gavialis gangeticus (Gharial): 109297324
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Entry
109297324 CDS
T07453
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109297324 (TOPORS)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109297324 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ggn03037
]
109297324 (TOPORS)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109297324 (TOPORS)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109297324 (TOPORS)
UBL E3 ligases
109297324 (TOPORS)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
109297324 (TOPORS)
Cilium and associated proteins [BR:
ggn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109297324 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
109297324
NCBI-ProteinID:
XP_019372565
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MQEKDMTPATEEFAVDSSFSPRAGTSRLHQTVPTDASPDSKCPICLDRFDNVAYLDRCLH
RFCFRCVQEWSKNKAECPLCKQPFHSIIHTVRAEDDFKEYILKPSENGSFASPNGRRFRY
RTTVTREHRTTTSSQRSSSSRRTLSPPDNGILFEAFSSQPVQQRDVGIQQMIRRLASRRQ
ASAEGRALRQIQEQEIINFRRALYRSGVRIRSVQDGGRYREISAEFFRRNPACLHRLVPW
LKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLGSKAFADDLKPFLLHRTDHFLHEFISFA
RCPFNIEAYDQHANYDCPAPSYDEGSHSESSVITISPDEADSQEPDHYASTTGTDQAPWD
DETPGPSYSSSEQVHAAVASPNTSESSDEEPARNGSDAQGQSRANTEPNDVSDASSDNCV
IVGYVKPLAERTPELVELSSDCEESVTEEKSENVKKPQPIQFHSFSDSEASGCSSLHSPV
SKDKSICKGSMSPLIKTAEAEKSEKDKTKIRDACTWDSLQGSSTRKNSVCSPCNHRLSRK
RRSRSSESSSQHSHGRDHHSRRSKRKHRSKESLKNRLPRSRDSSGHRSKRNRRRSRTRDT
SLSRKSLTLSLSSESTISRGVSRSRSRSNGHSKRRSRSRESDHYYIRENYQNRYQWGYTF
YSRHMDRDGYESSYRRRAQARAHYSRQSASPEYRIQSFSERTNTRNQRGHNESRYYCYER
RRSRSRSSNRSRATSGGTDRMRCEKPGGKRKYKTRHLESVHKEKAPSPAKGEGNGHQKPM
SKYSGCYQNENSPQENQASNETKHRKRKKKIRSPSVEIVYEGKATDTTSHHKKKKKKHKK
KHRRHHTGNSAPPSPVVITIDSDSDKEIGINETMECDSSVSWTTITQLNEQENESPSSLL
DASNHKDVYAVAGETAISNKDRRITTSRKDLADDIGNVDLQLQKISDEQTPAVAVSSSSS
YSSSSSSTLGIETLPINLETAQMEAPSHSPRTSFVDNSGRPPLILRLPKKLIDRSYWLDT
AEKKM
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagaaggatatgacccctgcaactgaggaatttgctgtggatagcagcttctca
ccaagagctggaacaagcagactacatcagacagtgcccacagatgcatctccagactca
aagtgtccaatctgtttggacagatttgacaatgtagcctatttagatcgttgtctgcat
aggttttgcttccgctgtgtgcaagagtggtcaaaaaacaaagctgaatgcccactctgt
aaacagccattccattctatcatccacactgtgagagctgaagatgattttaaagagtat
atactaaagccttcagagaatggctcttttgctagccctaatggacggagatttcgttac
cgcactacagttacaagggaacatcgtacaacaacgtcttctcaaaggagttcctcttct
cgaaggacgctgtcacccccagacaatggaatattgtttgaagcgttctcaagtcagccc
gtgcaacagagagatgttggaattcaacagatgataagaaggcttgcctcaaggaggcag
gctagtgcagagggcagggctctgcgacaaattcaagaacaagaaataattaacttccga
agagctctctatcgctctggtgtgcgcattagaagtgttcaagatggtggtcgctataga
gaaatttcagcagagtttttccgcaggaaccctgcttgtcttcacaggttagttccatgg
ttgaagcgggaactaactgtcctttttggtgcccatggttctttagtcaatattgttcag
cacatcatcatgagtaatgtgactagatatgatctgggaagtaaggcctttgctgatgac
ttaaagccttttttactccatcgcactgaccactttttacatgaatttatcagttttgcc
cgatgcccttttaacatagaagcatatgaccagcatgccaattatgattgtcctgctcct
tcatatgatgaaggaagccactcggaatcatcagttattacaatatctccagatgaggca
gattcccaggaaccagatcattacgcatccacaactggtactgatcaggccccttgggat
gatgaaactccaggaccatcatactcaagttcagaacaagttcatgctgccgtggcttct
cctaatacttcagaaagttctgatgaggaacctgctcgaaatgggtcagatgcacaaggg
cagtcacgagctaatacagagccaaatgatgtcagtgatgcttcttcagacaattgtgtc
attgttggttatgttaagccattagctgagagaacaccagaacttgttgagctgtcctct
gattgtgaggagtcagtcactgaggagaaaagtgagaatgtgaagaaaccacaacctatc
cagtttcacagtttcagtgacagtgaagctagtgggtgctcatcactgcactccccagta
tctaaagataaaagtatctgtaaaggcagcatgtcacccttgattaagacagcagaggca
gaaaagagtgagaaagataaaactaaaataagagatgcatgtacttgggactcattgcag
ggttcctctaccaggaaaaacagtgtgtgctctccgtgtaaccatagattatccagaaag
aggaggtcaaggagttccgagtcatcttcgcagcactctcatggcagagaccatcacagc
cgtagatccaagaggaaacatcgtagcaaggaaagcttaaaaaacagattaccaagaagc
agagacagtagcgggcatagaagtaaaagaaacagaaggagatcaagaactcgagacaca
agtttatctagaaaaagcctgactctctctctaagtagcgagagcactatatctagaggt
gttagtaggtcacgatcccgcagtaatggccatagtaaaagaagatcaaggagtagagag
agtgatcactattatataagagaaaattaccaaaatagatatcagtggggatacactttc
tacagtaggcacatggacagagatggttatgagtcctcatatagaagaagggctcaggcc
agagctcattattcaaggcagtcggcgagtccagaatatagaatacagtccttttcggaa
aggacaaatacacgaaatcaaagaggacacaatgaaagccggtattactgctatgaaaga
cgcaggtcaagaagtcgatctagtaatagatctagggccacatctggagggactgataga
atgcgatgtgaaaagcctggtggaaaaaggaaatacaaaacacgccacttggagagtgtg
cacaaggagaaagcaccaagccctgctaaaggggaaggaaatggccaccagaaacctatg
tcaaagtacagtggttgctaccaaaatgagaacagccctcaagaaaaccaagcaagcaat
gaaacgaagcatagaaagagaaagaaaaaaattagaagtccaagtgtggagattgtttat
gaagggaaggctactgacacaactagtcatcataaaaagaaaaagaaaaagcataaaaag
aaacacagaagacaccatacaggtaattcagcacctccttctccagttgtgattacaatt
gacagtgatagtgacaaagagattggaataaatgaaactatggaatgtgacagtagtgtt
tcttggacaaccataacccagttaaatgagcaagaaaacgaatctccatcgtctctcctg
gacgcaagcaatcataaggacgtatacgcagtagctggtgaaactgcaatatcgaacaag
gatcgtcgtattactaccagtaggaaagacctggctgatgacattggaaatgtagatctc
cagctccaaaaaatatcagatgagcagactcctgctgtggctgttagcagcagcagtagt
tatagtagtagtagtagcagtacactgggaatagaaactctgcctatcaatcttgaaact
gcacagatggaagcacccagccattctcccaggacatcatttgtagataactcggggagg
ccaccattaatattaagactgccaaagaaacttattgacagatcatactggcttgacact
gcagaaaaaaagatgtag
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