Gavialis gangeticus (Gharial): 109297382
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Entry
109297382 CDS
T07453
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn02010
ABC transporters
ggn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109297382 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109297382 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggn02000
]
109297382 (ABCA1)
Transporters [BR:
ggn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109297382 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
109297382
NCBI-ProteinID:
XP_019372643
LinkDB
All DBs
Position
Unknown
AA seq
2260 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGVVRNFNRSIVSRLFSDAKRLLLYSQQDS
SIKDVQQFLGKVRKLGKSGSGLKLHDFLVDNETFSDFLHQNMSLPPFAVDEILDAEVNLQ
RVIMSGYQMRLKDLCNASKLSDFVMIHNQTVAAVSEGFICNLPKEKLHAADLAFHANIDL
LKPLLKRISLESSLQDLSDATDTLIESLGKLVKELLSMKSWSDMRQEVMFLTNVNASSSS
AQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVASFYDNSTTPYCNE
LMKNLESSPLSRIIWRALKPLLIGKVLYTPDTPATRQVMSEVNKTFQELGVFRDLGGMWD
EIGPKIWTFMESSQEMDLIRTLLKSRGLWDMHLHGTNWTVEDISLFLAKRPEDIQLVNGS
TYTWMDAFNETDRAVQTISRFMECVNLDKLEPIATEVRLINKSMELLDERKFWAGIVFNE
IAPDSTELPPHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKVGNLLPYSDPSVVFV
FLSLFAVVTILQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVNFSLKIFAS
LLSPVAFGFGCEYFALFEEQGVGIQWDNFFRSPLEEDSFSLTTSAAMMLFDTFLYVVMTW
YIESVFPGQYGIPRPWYFPFTKSYWFGEESEKRQYPHSDQKGPSEVCMEEEPTHLQLGVS
IQNLVKVYRDGKKVAVDGLTLNFYEGQISSFLGHNGAGKTTTMSILTGLFPPTSGTAFIL
GKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLTEKEVKEEMEQMAMDVG
LPHKLKAKTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIMKHVPEARLVEDIG
HELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAET
SDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMKG
WKLTQQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQP
WMYDEQYTFISNDAPEDAGMQKLLDALINEPGFGTRCMQGQSILDTPCIVGQKEWTTASV
PDAVRDILLNGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQNTADILQNLT
GRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVNDAIRQVKKI
LELAKGGSGDRFLNSLASFMKGLDTKNNVKVWFNNKGWHAIGSFLNVINNAILRANLRRG
KNPNAYGITAYNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERV
SKAKHLQFISGVKPLIYWLANFVWDMCNYVVPATLVIIIFICFQQKSYVSSSNLPVLALL
LFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIND
ILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGV
VFFLITVLIQYRFFIKPRPVEAKLPPLNDEDEDVTRERQRIISGGGQSDILEIKELTKIY
RMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSKI
QEVHQNMGYCPQFDAISELLTGREHLELFALLRGIPEKEVCKVGDWAVRKLGLVKYGEKY
AGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTS
HSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIIVRIAGANPDLTPVQDFFGL
AFPGSVLKEKHRNMLQYQLPSSPSSLARIFSVLSQNKKRLHIEDYSVSQTTLDQVFVNFA
KDQSDDDHTKDLSLHKHQTVVDVAKLNSFLQDEKVKESCV
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagctggggttgctgctatggaagaacttcacttaccggagaagg
caaacttttcagctgctgattgaagttgcctggcctctctttatcttctttatactgatc
tccgtaagactttcatatccgccctatgagcaacatgaatgtcactttccaaataaggcc
atgccttcagcaggaaccttgccttgggtccaggggattatttgtaatgctaacaaccct
tgcttccgctacccaactcctggggaatcccctggtgttgtcagaaactttaaccggtcc
attgtttcccgcttgttctctgacgccaagaggttgctgttgtacagccagcaggacagc
agcataaaggatgttcagcagttcctgggaaaagttcggaagcttggaaagtctggctca
gggttgaaactccatgattttctggttgacaatgagacgttctcagacttcctccatcaa
aatatgtccctgccaccatttgctgtggatgagatactggatgctgaggtcaacctccag
cgggtcattatgtctggctaccaaatgcggttgaaagatctatgcaatgcatcaaagctg
tctgatttcgtcatgatccacaatcagacagtagcagcggtcagcgaaggcttcatttgc
aacctgcctaaggaaaagctccacgcagcagacctagcttttcatgctaatatagacctt
ttgaagcctctgctgaaaagaatttctctagagtcctccttgcaggacctttcagatgcc
acggacactttgatagagagtctcgggaagcttgttaaagagctgctgagcatgaagagc
tggagtgacatgaggcaggaggtgatgttcctgaccaatgtgaacgcttcaagctcctct
gcccagatctaccaggctgtgtcgaggattgtgtgtggccatcctgaggggggagggctg
aagatcaagtctctcaactggtatgaggacaacaattacaaagccctgtttggaggcaac
agcactgaagatgatgtagctagcttctatgataattctacaactccctattgtaatgag
ctgatgaagaacctggagtccagtccactttcccgaattatctggagggctctgaaacct
ttgctgattgggaaggtcttgtacactcctgacactccagccacaaggcaggtcatgtct
gaggtgaacaagacattccaggaactgggtgtgttccgtgaccttggaggcatgtgggat
gagataggccccaagatttggacgttcatggaaagcagccaggagatggatctgatccgg
acgctgctgaagagtagaggcctctgggacatgcacttgcatggcaccaattggacagtt
gaagacatttccctcttcttggcgaagagacctgaggacattcagctggtgaatggctca
acctacacctggatggatgccttcaacgagactgaccgggctgtccagacgatatcccgc
ttcatggagtgtgttaatctggacaaactggaacctatagccacagaagtgcggctgata
aataagtctatggagctgctggacgagaggaaattctgggctggtattgtcttcaatgaa
attgctccagacagcacagagctgccaccacatgtcaagtacaagatacggatggacata
gacaatgtagaaaggaccaacaagattaaggatgggtactgggaccctggtccccgcgct
gacccctttgaagacatgcgctatgtctggggaggttttgcctacctgcaggatgtagtg
gagcaggcaatcatcagggtgcagacgggcacagagaagaagaccggtgtctatgtgcag
cagatgccctacccatgttacgtggatgatatcttcctgcgtgttatgagccgctcaatg
cctctcttcatgaccctggcgtggatctactcagtggctgtgatcatcaaggggattgtg
tatgagaaggaggcccgcctgaaagagaccatgaggatcatgggtctggacaatggcatc
ctctggctcagttggttcattagcagtctcatccccctcctcatgagcgctgggcttctg
gtgctgatcttgaaggtgggaaaccttctgccgtacagtgaccccagcgtggtgttcgtc
ttcctctcgctctttgctgtggtgaccatcttgcagtgcttcctcatcagcactatattc
tcccgggccaatctcgcagcagcctgcggtggaatcatctacttcaccctctacctgccc
tatgtgctgtgtgtcgcctggcaggactacgtgaacttctctctcaaaatctttgctagt
ttgctgtccccagtagcctttgggtttggctgcgagtactttgcattgtttgaggagcag
ggagttggcatccagtgggacaacttcttcagaagccccctggaagaagatagcttcagc
ctcaccacctctgctgccatgatgctttttgacacattcctttatgtggttatgacttgg
tacattgagtctgtcttcccaggccagtatggaattcccaggccctggtatttccccttc
acaaagtcctattggtttggtgaagaatcggagaagaggcagtacccccattctgatcag
aagggcccttcagaggtttgcatggaggaagaacccactcatctccaacttggggtgtct
attcagaacctggtgaaggtttatcgtgatggcaagaaagtggctgtagatgggctcacc
ctgaatttctatgaagggcaaatctcctctttcctaggacataatggagccgggaaaact
accactatgtctatcttgactggcttatttcctccgacttcaggcacagccttcatcttg
ggcaaagatatccgctctgagctcagcaccatcaggcagaacctgggtgtctgtccccag
cacaacgtgctgtttgacttactgacggtagaagagcacatctggttctatgcacgcctg
aaaggcctgacagaaaaggaggtgaaagaggagatggaacagatggcgatggacgttggt
ttgcctcacaaactcaaggccaagacaagcaaactctccggtggcatgcagaggaagctg
tcggtagccctggcctttgtaggtggctcaaaggttgtcattctagatgagccaacagct
ggtgttgacccatactctcgcaggggcatatgggaactgctgctgaaatatcgacaaggc
cgcacaatcattctctccacacaccacatggatgaagcagacatccttggagaccgcatt
gccatcatttctcatggcaaactgtgctgtgttggctcttctctgttcctaaagaaccag
ctgggaacaggctattatctcaccctggtcaagaaggatgtggactcttcactgagctcc
tgtagaaacagcagcagcactgtgtcttacctgaaaaaggatgacagcgtgtcccaaagc
agctctgatgctgggcttggcagcgaccatgagagtgacaccctgacaatcgatgtgtct
gctatttccaacctcattatgaaacacgttcctgaggccaggctggtggaggacattggc
catgaacttacttatgtcttgccgtatgaagctgctagagagggagcctttgtagagctg
ttccatgagattgatgaccgcctctctgacctgggtatttcaagttacggcatctctgaa
actactttggaggagatctttctcaaagtggctgatgacagtggggtggatgcagagaca
tcagatggtacattacctgcaagaaggaataggcgggtctttggagacagacagagctgc
cttcgtcctttcacagaagacgatgcttttgaccccaatgattcagacatagacccagaa
tccagagagacagacctgctcagtgggatggatggcaaaggctcctaccagatgaaaggc
tggaagctcacccagcaacagtttgttgctctgctgtggaagaggctgctcatcgccaag
cgcagccggaagggcttcttcgcccagattgtgttgccagctgtctttgtgtgcattgcc
ctcatgttcagcctgattgtccctccctttggcaaataccccagcctggagctgcagcca
tggatgtatgatgagcagtacacctttatcagtaacgatgccccagaggatgcaggcatg
cagaagcttttggatgctcttatcaatgagcctggctttggaactcgctgcatgcaagga
caatccattctagacactccttgcatcgttgggcagaaggagtggaccacagcttcagtc
cctgatgcagtcagggacattcttctgaatggcaactggagcatggagaatccctcccca
tcctgtgagtgcagcaatgagaaaatcaagaagatgttgcctgtgtgccctcccggtgca
gggggactccctcctccacagagggagcaaaacactgctgacatcctacagaacctgaca
ggccggaacatatcggactatctggtgaagacgtacgcacaaatcattgggaaaagcttg
aagaataagatttgggtgaatgaattcaggtatggaggattttctctgggtgccagtagc
tcccttgtgcttcctccaagccatgaagtcaacgatgccatcaggcaggtgaagaagatc
ttggagcttgccaaggggggatctggagatcggtttctgaatagcttggcaagcttcatg
aaaggactggacacaaaaaacaatgtcaaggtgtggttcaacaacaagggctggcatgcc
atcggctccttcctgaatgtgatcaacaatgccatccttagggccaacctccggaggggc
aagaaccccaacgcttacggcatcaccgcctacaaccacccactgaacctcacaaagcag
cagctctctgaagtggcactgatgaccacatcagtggatgttttagtctccatctgcgtg
atcttcgccatgtcctttgtccctgccagctttgtagttttcctgatccaggagcgtgtc
agcaaagccaagcacctgcagttcatcagtggggtgaagccattgatctactggctggca
aactttgtctgggacatgtgcaactatgtggttcctgccacactggtcatcatcatcttc
atctgcttccagcagaagtcctatgtctcctcttccaacctgcccgtgctggcccttctg
ctcttcctctatgggtggtccatcacaccactgatgtaccctgcctccttcgtgttcaag
atccccagcactgcctacgtagtgctgaccagcgtgaaccttttcattggcatcaatggc
agtgtggccacttttgtactcgagcttttcaccaataataagctgaacaacatcaatgac
atcctcaagtctgtcttcctcatcttcccccacttctgtctgggtcggggcctcattgac
atggtgaaaaaccaggccatggcagatgctttagaaaggtttggtgaaaatcgctttgtg
tcccctctgtcctgggatctggtgggacgcaacctctttgccatggctgtggaaggtgtg
gtcttcttcctcatcactgtgctcatacagtacaggttcttcatcaagccaaggccggtt
gaagccaagcttccccctctgaacgatgaggatgaggatgtgaccagggagaggcagagg
ataattagtggtggaggacagagtgacatcctcgaaatcaaggagctgaccaagatttat
agaatgaagcgaaaaccagcagtggacaggatctgtgttggcatcccccctggagagtgc
tttgggctcctgggagtgaacggtgctggcaagtcatcaactttcaagatgctaactgga
gacacggatgtgacggggggagaagcttttctcaagggaaacagcatcctgtctaaaatc
caggaagtccatcagaacatgggctactgccctcagtttgatgctattagcgagctgctg
acaggaagagagcatctggagttatttgcactcttaagaggcattccggagaaagaagtt
tgcaaggtcggggactgggcagttcgtaaacttggtcttgtaaaatatggagaaaaatat
gctgggaattacagtggagggaaccggcgcaagctgtctacagccattgccctgattgga
gggcctccagtggtattcctggatgagccaaccacaggaatggatcccaaagcacgacgc
ttcctttggaactgtgctctgagtgtcatcaaggagggcagatcagtggtgctgacatct
cacagcatggaagaatgtgaagccctgtgtactcgaatggcaataatggtcaatgggcgg
ttcaggtgtctgggaagcgtccagcatctgaagaacaggtttggagatggctacaccatc
atcgtgcggatagcgggagcaaaccccgacctgacgcctgtgcaggacttcttcgggctt
gcgttcccaggcagcgttctgaaggagaagcatcgaaacatgcttcagtaccagctccca
tcctcgccatcctccctggccaggatattcagtgtcttgtctcagaacaagaagagactc
cacatagaagactactccgtttctcagactacacttgaccaagtatttgtaaactttgcc
aaggaccaaagtgacgatgaccacacaaaggacttgtcattgcacaaacaccagactgtt
gtggatgttgcaaagctaaattcctttctgcaagatgagaaggtgaaagaaagttgtgtg
tga
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integrated database retrieval system
