Gavialis gangeticus (Gharial): 109297617
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Entry
109297617 CDS
T07453
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109297617 (DENND4C)
Membrane trafficking [BR:
ggn04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
109297617 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
109297617
NCBI-ProteinID:
XP_019373053
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTSTLLDQEISRCETKSTGPKAPITDIAVIIKSAGETVPEG
YTCVEATPTALQANLNYGSLKSPELFLCYKRGWDKPPLTDIGVLYEGKERVISGCEVIQA
TPYGRCANVNNSSATSQRIFITFRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVYLCYKKSVPASNSIAYKTGLIFRYPEEDYESFPLSESVPLFCLPMGATI
ECWDPQTKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSRELLTEKQQLQLSLLTAVGRK
VATAKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPFPS
PQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATVLLFVLLEGKILL
HSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPVPFIVGVDSRYFDLYDP
PQDVVCIDLDTNMVYISDDKKSTNWKQLPKKPCKILLSTLKKLHPQLASVHRKTQEGSAV
EMTPIEADFSWQKKMMELEMEIQEAFLRFMASILKGYRPFLKPITQAPSNKATAADSLFD
HQGFLKSRDRAYTKFYALLTKTQIFSRFIEECSFVSDKDTGLAFFDDCTEKVDVDSAEDT
RLIELDESQKSEHTVFIMPPEPPPEDGQDWAPKYSYKNFPRLDLKIFDRPQELKLSFNRH
PAGGSISNSPALMAKRTKQEIKTAHKLAKRYYTNPPQWAKCLFSHCYSLWFICLPAYVRV
AHLKVKALQQAYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGHPVQAVRVLFEMKNAGIQ
PNAITYGYYNKAVLESPWPSSNRSGIFLWTKVRNVVRGMARFRQCLKKATRSSQVPVIPV
PRNAMGGSDGDTVSHGSVDSSNDANSGEHTLFVRNLVRLDSIDNHCSTGGQSDQGYGSKD
ELVREDGYRLRTNGTLMGKKFSKTEDLTKEVCVADDSGEKQQLNTELHSMTEPPIWGNSI
VKVPSGIFDGTGRKSSGGTASTLLFMAQDSIEDSVFDDASPRKTSEKGQKRQKLFSERSC
SFSSESRAGMLLKKSSLDLISSEIAIMMGADAKILTAALSGTKISPTHTVKSLNFDSMGD
QQVPGLSGNRTHMNKGTWELEHRSSPVMEEPEEGPEHLENGSDDNADKAENHLTKLLAGN
QSTNGKMEPKDAVNKRNSLYGVVKPVEREDVEVGSDPLSLLATESIEPKCSETEEKTTPV
VSRYLADEIESYMNLKSPVGSKFPSMELHKEESRKTTVSSTLDHSQDKRSSLPSDSIPPV
PDQHESRKSPSVSRSKTFAGRPKQPSRSRAQKERSSSVTGLGHSPQHGSLGSVVTTLSSL
KLDNILSGPKIDVLKSGMKQAANVASKMWGAVTSAYNYAEDEEETHQQDFPFPTGLEDHL
LGDNLSPKTGILGLVTSELTQSTTSLGSSNSSGDVGKQQYPTGEISFPRSMKGLDSEKSE
HGSSHNTSLSSIFQNCAMEVLMSSCSQCRACEALVYDEEIMAGWTADDSNLNTTCPFCKS
TFLPLLNVEFKDLRGSASFFLKPSTSGDSLHSGNIPITTDPLELKPASSSAVADLMSFSD
HPSSNQTIVEETSSTPEQSNKPEEQSKGPRAVTTSGNNPQKREASLTRSHSVGGPLQNID
LSQRPSHGISTVSLPNSLQEVVDPLRKRPNPLPVSVPYLSPLVLRKELESLLENEGEQVI
HTSTFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNEGVQLPLSSLSQDSKLVYIQ
LLWDNINLYQEPGEPLYISWRNLNSAEKKPSTTSEDQQAISTLLENIKLSIQHNNVLKPI
NFLLQKVQPGVKRQRSFYREILFLSLVSLGRENIDIEAFDSEYRIAYKGLASDVLEKMQK
MDAPPGSRVEWCRKCFGAPLI
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaagggtccaagggtggctgactactttgtagtggcaggactgactgac
acttcaactcttctggaccaagaaataagccgctgtgaaacaaaatcaaccggtccaaag
gctccaattacagacattgctgtcattatcaagtcagccggtgaaactgtccctgagggt
tacacctgtgttgaagccacccccacagcccttcaagccaacttgaactacggcagtctt
aaaagtccagagctttttctttgctacaagaggggctgggacaaaccacctcttacagac
attggagttctatatgaagggaaagaacgggtaatttcaggctgcgaggtgatccaggct
actccatatggccgatgtgccaatgttaacaacagttcagctacttcccaacgaatcttt
attacctttcgaagggctcctcctgttcggcctcagaattctttggctgtaacagatatt
tgtgttattgtgaccagcaaaggagaaacccctccccatacgttctgcaaagttgacaag
aacttaaattgtggcatgtgggggtccagcgtgtacctttgttacaaaaagtctgtgcca
gcttccaactcaatagcatataaaactggcttgattttcagatatccagaggaggattat
gagtcattcccattgtcagaatctgttcctctattttgccttccaatgggagctactatt
gaatgctgggatcctcaaaccaaatatccactaccagtgttctcaacatttgtactgact
ggttcttctgcagaaaaggtctatggtgctgctattcagttttatgagccttattccagg
gagctgctaacagaaaagcagcaactgcagctgagcctcctgacagctgtggggagaaaa
gtggctactgccaagtccatcaattccaacaaatgtatctgccttctctcacattggcct
ttctttgaagcctttcgaaaatttcttatgttcatctacaagctttctgtttctgggcct
catcctcttcccattgaaaagcatatatcccactttatgcataatataccttttccttca
cctcaaaggccaaggatccttgtacagctttctgcccatgacgcattaatactgtctcaa
ccagtttctacacctttaccactcagtggagcaaacttcagcaccctgctaatgaatctt
ggaccagaaaactgtgctactgtgctactctttgtactcttagaaggcaagatcctattg
cactcccttagaccagctgtgctgacgggtgtagctgaagctgtagtagctatgatattt
ccattccaatggcaatgtccatacatccccctctgtcctttgtctctggcaacggtgctc
agtgctcctgttccatttatagttggagttgattcacgatactttgatctgtatgatcca
ccacaggatgttgtttgcattgacttagacacaaacatggtgtacatttcagatgataag
aagagtacgaactggaagcagcttcctaagaagccatgcaaaattctgttgagcacttta
aagaaactacatccacagttagcatcagttcacagaaagacacaagaaggttctgcagtg
gaaatgactcctatagaggcagatttctcttggcagaagaagatgatggaacttgagatg
gaaatccaggaggctttcctacgcttcatggcatctattttaaaggggtacagaccattc
ctcaagccaatcacacaggcaccttcaaataaagctactgctgctgattccttgtttgac
catcaagggtttttaaaaagtagagaccgtgcctacacaaaattttatgcacttctaaca
aaaacacagatatttagccgcttcatagaagagtgcagttttgtgagtgacaaggacact
ggcttggcattttttgatgactgcacagaaaaggttgatgttgactctgcagaggacaca
cggttgattgagcttgatgagtcacagaagagtgaacacacagtgtttataatgcctcca
gaacctccccctgaagatggacaggactgggcccctaagtacagctataaaaacttccca
agactagacttgaagatatttgacaggccacaggagctcaaactttctttcaacagacac
ccagctggaggcagcatttcaaatagcccagcactcatggcaaaaagaacaaaacaggag
ataaaaacagcccataaattagccaagaggtattacacaaaccccccacagtgggccaag
tgtctcttcagtcattgttacagtctgtggtttatttgtctgccagcctatgtcagagtt
gcccatcttaaggtcaaagcactgcagcaggcatatgatgttctcattaaaatgagaaaa
actgacgtggaaccacttgatgaggtatgctatagagttgtaatgcagctgtgcggactt
tggggccatcctgttcaggcagtgagagtcctttttgaaatgaaaaatgctggaatacaa
ccaaatgcgatcacctatggttattataacaaggcagttctggagagcccatggcccagc
agtaaccgcagtggtatatttctgtggacaaaggtacggaatgtggtccgtggcatggca
cgatttaggcagtgcctaaaaaaagcaacacggagttcacaggtcccggtgataccagtt
ccacggaatgccatgggtggaagtgatggggacacggtgagccatggtagcgtggatagt
tctaatgatgctaacagtggggagcacacactcttcgtcagaaacttagtcaggcttgat
tccattgataatcactgtagcacaggtggtcagtcagaccaggggtatggatccaaggat
gaacttgtacgggaggatggatataggcttcgtacaaatgggacactaatgggaaaaaaa
ttttctaaaactgaagacttgacaaaagaggtctgtgttgcggatgactctggtgaaaag
cagcagctgaatacagaacttcacagtatgacagagccacccatctggggaaacagtatt
gtgaaagttccatctggcatttttgatggcactggcagaaaaagcagtggtggaactgca
tctaccctactcttcatggctcaggattccattgaagattcagtctttgatgatgcttct
cccaggaaaacaagtgaaaaaggacaaaagagacagaaacttttttcagagaggagctgc
agttttagcagtgaaagcagagcaggtatgctgttgaagaaaagcagtttggacttgatt
tctagtgaaattgcaataatgatgggagcagatgccaagattctcacagctgctttatct
gggaccaaaatatcacctacacatactgttaaatcccttaactttgacagtatgggtgac
cagcaggtccctgggctgagtggtaataggactcatatgaataaaggtacttgggaattg
gaacataggtcatcaccagtgatggaggagcctgaggaagggccagaacaccttgagaat
ggaagtgatgacaatgcagacaaagcagaaaaccaccttaccaaactgctggctggtaat
cagtccacaaatgggaaaatggaacccaaagatgcagtgaataaaaggaatagcttgtat
ggagttgttaagcctgtagaaagggaagatgttgaagtgggctcggatcctttgtctctg
ctggctactgaaagcatagagccaaaatgctcagagactgaggaaaagacgacaccagtt
gtatcgcgttatctggctgatgaaatagaaagctacatgaaccttaaaagccctgttggt
agcaaatttcccagcatggagttacacaaggaagagagcagaaaaacaacagtatctagt
acacttgatcactcccaagacaagagatcaagcctaccttcagattccattccaccagtt
ccagatcaacatgaaagtaggaagagcccttcagtttccaggtccaaaacctttgctggg
cgaccaaaacaaccgtcccgttcacgagcgcagaaggaacggtcttcatctgtaacgggg
ctgggtcattctcctcagcatggctcactggggtctgtggttacgactttatccagtctg
aagttagataacatactttctggaccgaaaatagacgttctgaagtcaggcatgaaacaa
gcagctaacgtagccagtaagatgtggggagctgtaacctcagcctacaactacgcagaa
gatgaggaagaaactcatcagcaagacttcccctttcccactggattagaagaccacctt
ttaggagataacctgtcaccaaaaacaggaatcctggggctggtaaccagtgagctcaca
cagagcactaccagtctaggtagcagcaacagcagtggagatgtaggaaaacagcagtac
ccaacaggtgaaatttcattcccaagaagcatgaaaggtctggattctgagaagtcagaa
catggctcctcccacaatacgagtttatctagcatcttccagaactgtgcaatggaggtt
ttgatgtcaagttgctcgcaatgtagagcatgtgaagctttagtttacgatgaagaaatt
atggctggatggactgcagatgattctaacttgaacaccacttgtcccttctgtaaaagc
actttcttacctcttcttaatgtggaatttaaagacttgcgtggctctgctagctttttt
ctgaaaccaagtacctctggagatagtttacacagtggtaacattccaataactactgat
cctctggagctgaaacctgcatccagctctgctgttgctgatttgatgagtttttcagat
catcctagctccaaccagaccatagttgaagaaacaagctctacacctgagcagagtaat
aagcctgaagaacagagtaagggccccagagcagtgacaacatctggcaacaatccacaa
aaacgagaagcatctttgactcggagccatagcgtggggggccccctgcaaaatattgat
ctgtcacagagaccatctcatggaatttcaacagttagccttccaaacagtttgcaagaa
gttgtggatcccttaagaaaaaggcccaatcctcttcccgtctctgtaccttatttgagt
cctctggtgctgcgtaaagagcttgaatccttgttggagaatgagggggaacaagtgata
catacatccacattcatcaaccagcaccccatcattttctggaacttggtttggtatttc
cggcgcttggatctacctagcaacttgcctgggctcattttaacctcagaacattgtaac
gagggagtgcagcttcctctgtcatctctgtcacaagacagcaagttagtgtacatccag
ctactgtgggacaacatcaatctctatcaggagccaggcgagcctctgtatatatcctgg
agaaatttgaattcagcagagaagaaaccatccacaacttcagaagaccagcaggcaata
agcactttgttagagaacatcaaactaagtattcaacacaataatgttcttaaaccaatc
aacttccttctgcagaaagttcaaccaggtgtcaaacgacaaagaagtttttaccgagaa
atcctgttcctgtctttggtgtcccttggcagagagaacatcgacattgaggcctttgac
agtgagtacagaattgcatataaaggcctagcttctgatgtgcttgaaaagatgcagaaa
atggatgcacctccaggcagcagggtggagtggtgcagaaaatgttttggagcccctctc
atttaa
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integrated database retrieval system
