Gavialis gangeticus (Gharial): 109297677
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Entry
109297677 CDS
T07453
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109297677 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109297677 (SMARCA2)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109297677 (SMARCA2)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109297677 (SMARCA2)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109297677 (SMARCA2)
Chromatin remodeling factors
BAF complex
109297677 (SMARCA2)
PBAF complex
109297677 (SMARCA2)
GBAF(ncBAF) complex
109297677 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
109297677
NCBI-ProteinID:
XP_019373189
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPTVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHDKGMVDDMHCSSMKSASMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPMIPGDPQVMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQASANYTRLPGFGTSPITGPPA
GPVPASGMPGHAATMTPKPWTEGQGPDMSVPSTQQKLAVPPPSGRPSPAPPATQPSAAMP
GPSVPQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELEN
LPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTL
REARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATW
HANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTSL
VWEHKQAQAAKEKKKRRRRKKKAEENAEGMGSGLGPDGEPIDESSQMSDLPVKVTHTETG
KVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLETDEKRLL
DPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLING
TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV
EYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMF
QHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIM
EDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQFFIFLLSTRAGGLGLNLQAADTVI
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDMFMRMDMDRRR
EDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTE
KQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPK
LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK
YRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEDESEDESNDDE
EDEDEDESESESKSVKVKIKLNKKDEKIRDKGKGKKRQSRVKAKPVVSDDDSDEDQDEND
QSEASGSDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccaacagaccctggcgcaatgcctcatcctggcccttctccagggccaggt
ccatcacctggaccaattctaggacctagcccaggacctggaccatccccaggttcagtg
cacagcatgatggggccaagtcctggacctcccactgtcccgcatccgatgccaactatg
gggcctactgattatccacaggaaggcatgcaccaaatgcacaagtccattgacggcttg
catgacaaaggaatggttgacgatatgcactgtagctccatgaagagtgcaagtatgcga
ccacctcaccctggaatgggcccacctcagagtcccatggatcaacatagccaaggttat
atgtctcctcacccatctcctttgggagcaccagagcatgtgtccagtccaatgtctgga
ggtggccctactccacctcagatgacaccgagtcagccaggacctatgataccaggagac
ccacaggttatgagccagcccaacagaggtccttcacctttcagccctgtccagctgcac
cagctccgtgctcagattctagcatacaagatgttagctagaggtcagcctttaccagaa
aatcttcaacttgctgttcaagggaagaggactctgcctggaattcaacagcaacaggct
tctgcaaactatacccgactccctggttttgggacatctccaataactggtcctccagct
gggccagtacctgcttcaggaatgccaggccatgcagctactatgacccctaaaccttgg
acagaaggccaaggcccagatatgagtgttcctagtacacagcaaaagcttgctgtacca
cctcccagtggaagaccctctcctgcccctcctgccacccagccttctgcagccatgcct
ggtccttctgtaccacagccaacacctggacagccttcgcctattgtccagctgcagcag
aaacagaaccgtatcagtcctatccagaaaccacaaggcttggatcctgttgaaatactt
caggagcgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaat
ttgcctggctctttgccccctgacctgcgaaccaaagctacagtggagctgaaggcactt
aggttactgaatttccagcgccagctaagacaagaggtggtagcttgcatgcgtcgtgat
acaacattggagacagcgctaaattccaaagcctacaagcgcagcaagcgacagactctg
agggaagcccgcatgacagaaaagcttgagaaacagcagaaaatagagcaagagagaaag
cgcagacagaagcaccaggaatatctgaacagtatattgcagcatgctaaagatttcaag
gaatatcaccggtcagtggctgggaaaattcagaaactttctaaagccgtggcaacctgg
catgccaacactgagcgtgaacagaagaaagaaactgaaagaattgagaaagaaagaatg
agaagactcatggctgaggatgaagaaggctaccgtaaactgattgaccagaagaaagac
cgacgtctggcatacttgctgcagcagactgacgaatatgtggctaacctaactagtctg
gtgtgggagcacaagcaggcacaagcagccaaagagaagaagaagaggaggagaagaaag
aagaaggcagaggagaatgcagaaggaatgggatctggtcttggtcctgatggagagccc
atagatgagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaactggc
aaagttcttcttggaccagaagcaccaaaagcaagtcagctagatgcttggttagaaatg
aaccctggctatgaagttgctcctaggtcggacagtgaagacgaaagtgggtctgaatat
gaggaagaggatgatgaagaggagtcgagtagattagaaacagatgagaagagacttcta
gatcctaacagtgaagaagtttctgagaaggatgctaaacagatcattgagacagccaaa
caagatgtggatgatgaatacagtatgcaatatagtgctagaggatctcaatcctactac
acagtcgctcatgcaatcacagaaagggtggagaagcagtcttcccttcttattaatggc
acactaaaacattaccagctccagggcctggagtggatggtttcactctacaataacaat
ttgaatggaattttagctgatgaaatgggactaggaaagaccatacagactattgcactc
atcacttatctgatggagcacaaaagactcaatggcccctatcttatcattgttcccctt
tcgacattatccaactggacatatgaatttgacaaatgggctccttctgtggttaaaatt
tcttacaagggtacacctgctatgcgtcgctcacttgttcctcagcttcgaagtggaaaa
tttaatgtccttttaactacttatgagtacataataaaggacaaacacattcttgctaag
attcgatggaaatatatgatagtagatgaaggacaccggatgaagaaccatcattgcaag
ttgactcaggtcttgaacactcactatgtggcccccaggcggattctgttgactgggact
ccactgcaaaacaaattgcctgaactttgggctctcctcaatttcctccttcccaccatt
ttcaagagctgcagcacctttgagcagtggttcaatgctccatttgccatgactggagaa
agggtggacttaaatgaagaagaaactattctgatcatccggcgtctgcacaaagtgcta
cgacctttcttgctgagaagactgaagaaagaggttgaatctcaactgccagaaaaggtt
gaatatgtgatcaagtgtgacatgtcagctctccagaagatcctgtaccgccacatgcaa
gccaagggaatcctcctcacagatggctctgagaaagacaagaaggggaaaggaggggca
aaaacactgatgaacactatcatgcaattgagaaagatatgcaatcatccatatatgttt
cagcatattgaggagtcctttgctgaacatttagggtattcaaatggtgtcatcaatgga
gctgagctttatcgggcctcagggaagtttgagctacttgatcgtattctaccaaagttg
cgggccactaatcaccgggtgctgcttttctgtcaaatgacatcacttatgaccattatg
gaagactattttgcttttcgaaatttcctttatctccggcttgatggtacaacaaaatca
gaagatcgggctgctctgctgaagaagttcaatgagccaggttcccagttctttatcttc
ttgctgagcacaagggcaggaggtctgggtttgaatcttcaggctgctgacactgtcatt
atctttgatagtgactggaatcctcatcaggacttgcaggcacaagacagagctcaccga
attggccagcagaatgaggttcgagtcctgcgactatgcactgtaaacagcgtggaggag
aagatacttgctgctgcaaaatataaattgaatgtggatcagaaagttattcaagctggc
atgtttgatcagaaatcttcaagccatgagcgcagggcctttctacaggccatattggaa
catgaagaagaaaatgaggaagaagatgaagttcctgatgatgagactctgaatcagatg
attgctcgacgggaagaggaatttgatatgttcatgcgcatggacatggaccgtcgcaga
gaagatgctcgaaaccccaagcgcaagccccgcttgatggaggaggatgaactgccatcc
tggattattaaagatgatgctgaagtggaaaggcttacctgtgaagaagaggaagaaaaa
atatttgggcggggatctcgccagcgcagggatgtggactacagcgacgctctcactgag
aaacagtggctaagggcaattgaagacggcaatttggaagagatggaagaggaagttcgg
cttaaaaaacggaagagaagaagaaatgtggataaggattctgggaaagaggacggggag
aaggcaaagaagagaagaggaagaccccctgcagagaaattgtcgcccaacccacctaaa
ttgaccaaacagatgaatgctattatagataccgtgataaactacaaagacagttcagga
cggcagctaagtgaagtcttcattcagcttccatctaggaaagaattaccagagtattat
gaattaattaggaagccagtagacttcaaaaaaataaaggagcgaatccgtaaccataaa
taccggagccttggcgacttggagaaggatgtcatgttgctgtgtcacaatgctcagaca
ttcaatttggaaggatcacagatctatgaggattccattgttctccaatctgtgttcaag
agtgcacggcagaagattgccaaagaggatgagagcgaagatgaaagcaacgatgatgaa
gaagatgaggatgaagatgaatcagagtcagaatcaaaatccgtgaaagtcaaaatcaag
ctgaataagaaggatgaaaaaatccgagacaaagggaaaggcaagaagcggcaaagccgg
gtaaaagcaaagcctgtcgtgagtgatgatgacagtgatgaggatcaagatgaaaatgac
cagtcggaagcaagtggaagtgatgatgagtga
DBGET
integrated database retrieval system
