Gavialis gangeticus (Gharial): 109297744
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Entry
109297744 CDS
T07453
Symbol
THBS4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04145
Phagosome
ggn04510
Focal adhesion
ggn04512
ECM-receptor interaction
ggn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109297744 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109297744 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
109297744 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109297744 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109297744 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggn04147
]
109297744 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
ggn00536
]
109297744 (THBS4)
Membrane trafficking [BR:
ggn04131
]
Endocytosis
Phagocytosis
Opsonins
109297744 (THBS4)
Exosome [BR:
ggn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109297744 (THBS4)
Exosomal proteins of colorectal cancer cells
109297744 (THBS4)
Exosomal proteins of bladder cancer cells
109297744 (THBS4)
Glycosaminoglycan binding proteins [BR:
ggn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109297744 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
109297744
NCBI-ProteinID:
XP_019373291
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MSPRGAACLLLQLLLQLWPGRGAQPVPQVFDLLSYPNQRLLRNFLQQTLADPTLNEVYLL
STFKLQPKSTATIFGLYSSLENSKYFEFTVIGRLNRAALRYLRSDGRLNSVIFNNIQLAD
GKRHAVLLRLSGLHRGSSKVEMYVDCMQVDVIQDLPKAFSGLSQSPEFVELRTLQRKAQD
ILDELKLVVRGSLSQVGSLQDCFLQQIEPAVQYTGDFNRQLMSQMMQMNQILGDVKDLLR
QQVKETTFLRNTIAECQACGLGPMDFPTSPPRPPKPRCEATSCFRGVRCTETADGFQCGP
CPEGFTGNGVTCSDTDECRYNPCFPGVQCVNSVPGFRCEACPPGYKGQTVQGVGINYAKN
NKQVCSDIDECNNGGNEVCVPNSHCINTLGSYRCGPCKTGYVGDQIKGCNAEKSCRNRAL
NPCSIYAQCIEERQGDVSCVCGIGWAGDGYICGKDVDIDGYPNEDLTCSADTCRKDNCRF
VPNSGQEDADGDGIGDACDDDADGDGIPNEQDNCVLIPNVNQKNSDQDIFGDACDNCRTV
PNNDQKDTDGDGKGDACDDDMDGDGIKNLLDNCQRIPNQDQKDEDNDGVGDACDSCPRIS
NPNQSDIDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSSQLDTDKDGLGDECDDDDDN
DGIPDLIPPGPDNCRLVPNPGQEDENTDGVGDICESDFDQDTVIDPIDVCPENAEITLTD
FRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNT
VTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKAVKSKTGPGEHL
RNSLWHTGDTTDQVKLLWKDPRNVGWKDKVSYRWFLQHRPQMGYIRTRFYEGSELVADSG
VTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFEEFQAQQFGVGDI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcgcggagccgcctgcctgctcctgcagctgctgctacagctgtggcccggg
cggggcgcgcagccggtcccccaagtttttgatcttctttcatatcccaatcagagactt
ctaagaaactttctacaacaaacacttgctgatcctacattgaatgaagtgtacctgctc
tcaacattcaaattgcaaccaaagagtacagccaccatatttggcctatactcttcactt
gagaatagcaagtattttgaattcacagtgataggacggctgaatagagctgccctccgt
tatttgaggagtgatggaaggttaaactctgtgatcttcaacaatatccagctggctgac
gggaaacgccacgcagtcctcttgaggctgagcggcctgcacaggggatcaagcaaagta
gaaatgtatgtggactgcatgcaggtggatgtcattcaggatctaccaaaagcattttca
ggtctatcgcagagtccagaatttgtggaattacgtactctacagagaaaggcacaggac
attttggatgagctcaagctggttgtgaggggctccctttcccaagtaggaagtcttcaa
gattgctttcttcagcagattgagcctgcagttcagtacacaggtgatttcaataggcag
ttaatgagtcaaatgatgcaaatgaaccaaatactgggagatgtgaaagaccttctcaga
cagcaggtgaaggaaacaacttttctgagaaataccatagctgaatgccaagcatgtggt
ttaggacctatggactttccaacttcaccccctcgtcctcccaaacccagatgtgaagcc
acctcctgtttcagaggagtcaggtgcacagaaacagcagatggatttcagtgtggtccc
tgccctgaagggttcacaggaaatggagttacgtgctcagatactgatgagtgccgctat
aacccatgttttcctggggttcaatgtgtgaacagtgtccccggtttcagatgtgaggct
tgcccccctggatataaagggcagacagtccagggggtaggaatcaactatgccaagaac
aataagcaggtctgctcagatattgatgagtgtaataatggtggaaatgaagtgtgtgtt
cccaattcccactgtataaacaccttggggtcttatcgctgtggaccatgcaaaactgga
tacgtgggagaccagatcaagggatgcaatgctgagaaaagctgcagaaatcgagcactg
aacccatgcagtatctatgcacagtgtattgaggagaggcaaggagatgtttcatgtgtt
tgtggtattggttgggctggtgatggttatatctgtggaaaggatgtagatattgatggc
tatcctaatgaagacctcacatgctctgctgacacctgcagaaaggacaactgcagattt
gttccaaactctggacaagaagatgcagacggtgatggaataggagatgcctgcgatgat
gatgctgatggagatggaatacctaatgaacaggataactgtgttttaatccctaacgtt
aaccagaagaatagtgatcaagatatctttggggatgcttgtgataactgtcgtacagtg
ccgaataatgaccagaaggacacagacggtgacgggaaaggagatgcctgtgatgacgac
atggatggagatggtattaagaaccttttggacaactgtcagaggatccccaaccaggac
caaaaggatgaggataatgatggtgttggtgatgcttgtgacagctgccctcgtatcagc
aaccccaaccagtcagacattgacaatgacctggttggagattcttgtgataccaatcaa
gacagtgatggagatggacaccaggacagcacagacaactgccccacagtcattaacagc
tctcagctggacacagataaggatgggctaggcgatgaatgtgatgatgacgatgataat
gatggaattccagacctcattcccccaggccctgacaactgtaggcttgttcccaaccca
ggacaggaagatgagaacactgatggtgttggtgatatctgtgagtctgattttgatcag
gacacagtaattgatccgattgatgtttgcccagagaatgcagagatcaccctcacggat
ttcagggcttatcagacagtggtgctggatcctgaaggtgatgctcagatcgatcctaac
tgggtggttctaaaccagggtatggaaattgtgcagaccatgaacagtgatcctggcttg
gcagttggttacaccgcttttaatggcgttgacttcgaaggcaccttccatgtcaacacg
gtgacagatgatgattatgctggttttatcttcggttatcaagacagttccagcttttat
gtagtcatgtggaagcaaacagagcagacctactggcaagcagctccgttcagagctgtt
gcggaacctggcattcagcttaaggctgtgaaatcaaagactggcccaggagaacacctc
aggaactcactctggcatacaggagacaccactgaccaagtcaaactgctgtggaaagac
cccagaaatgtagggtggaaagataaagtctcctatcgctggttcttgcagcatagacct
cagatgggatatatcaggacaaggttttatgaaggttctgaactagtagcagattctggc
gtaacgattgacaccactatgcgtggagggagactcggcgttttctgcttctctcaggaa
aacatcatttggtccaacctgaagtatcgctgcaatgacaccatcccagaggactttgaa
gaatttcaagctcagcagtttggagttggagatatttaa
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