KEGG   Gavialis gangeticus (Gharial): 109297791
Entry
109297791         CDS       T07453                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn03420  Nucleotide excision repair
ggn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109297791 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109297791 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ggn04121]
    109297791 (ERCC8)
   03400 DNA repair and recombination proteins [BR:ggn03400]
    109297791 (ERCC8)
Ubiquitin system [BR:ggn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     109297791 (ERCC8)
DNA repair and recombination proteins [BR:ggn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109297791 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD_LRWD1 Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR75_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_WDR11_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 109297791
NCBI-ProteinID: XP_019373364
LinkDB
Position
Unknown
AA seq 399 aa
MLGFISARQAGLDDPLRLRRAESTRRVLSLELNKDRDVERIHGSGVNTLDIEPVEGRYML
SGGSDGVVILYDLENFSKKTCYTCKAVCSVGRSHPDVHRFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFNFEGTVYSHHMSPIATKHCLIAVGTKSPKVHLCDLKSGSCSH
ILQGHRQEVLAVCWSPRYEHVLATASADSRVKLWDVRRASGCLFTLDQHNGEKSKASSEA
ANTAHNGRVNGLCFTSDGLHFLTVGTDDRMRLWNSSTGENTLVNYGKVPNTSRKGIKFAI
SRGCNPEFAFVPYDSNIAVYTVYSGELITMLRGHYSTVDCCVFQSDFQELYSGSKDCNIL
AWVPALREPVPEEDNEKSVPLQSLNPAYEDAWSSSDDEG
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgttgggcttcatttcggcgcgtcaggctgggctcgacgacccgttgcggttgcgccgg
gctgagtccacccggagggtgctaagtctggagttaaataaagacagagatgtggaaaga
atccatgggagtggtgttaatacccttgatattgaacctgttgagggaagatacatgtta
tcaggtggatcagatggtgttgttatactttacgaccttgaaaacttcagcaaaaaaaca
tgttatacgtgtaaagcagtttgttctgtgggcagaagccatcctgatgtacacagattc
agtgtagagacagttcagtggtaccctcatgatactggcatgttcacatcaagctcattt
gataaaacattgaaaatatgggatacaaacacactacaacctgcagatgtatttaatttt
gaaggaacagtttatagccatcacatgtctcctattgctaccaagcactgtttgatagca
gttggtaccaaaagccctaaagtacatctctgtgacttgaagtctggatcctgttctcat
attctgcagggtcacagacaggaagtgctagcagtatgttggtccccacgttatgaacac
gtgttggcaactgcaagtgctgacagtagagtaaaactatgggatgtgaggagagcatct
ggatgtctgtttactcttgatcaacacaatggtgaaaaatccaaagcatcttctgaagct
gcaaatactgcgcataatggaagagttaatggcttgtgttttacaagtgatgggcttcat
tttctgactgttggtacagatgataggatgagactctggaacagttccactggggaaaac
acactggtgaactatggaaaagttcctaatacgagtaggaaaggaatcaaatttgccatc
tctcgtggctgtaatccagaatttgcttttgtgccatatgatagtaacattgctgtttac
acagtttactctggtgaattgataactatgctcagaggacattacagcactgttgattgc
tgtgtattccagtctgattttcaggaactatatagtggtagcaaagattgcaatatccta
gcttgggtgccagctctacgagaacctgttcctgaagaagataatgaaaagtctgtacct
ctacaaagcttaaatccagcctatgaagatgcatggagcagcagtgatgacgaaggatga

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