Gavialis gangeticus (Gharial): 109297888
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Entry
109297888 CDS
T07453
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109297888 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109297888 (NIPBL)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
109297888 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
109297888
NCBI-ProteinID:
XP_019373495
LinkDB
All DBs
Position
Unknown
AA seq
2841 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GMMMPQYKLSQNSMHGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVSGGMRNIHENKVSSQLSGNSANHHADNT
RHGSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGTPKGSRPPLILQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSNVSEGDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQPVSQQGTITPYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSAGNGSKPA
LLVSINLQQAGRVDSQATVTQDSDTIKKPEEIKQCNDGSIFVPQEDTVGVLKLKPENHPE
TLRKKLDSEGQKTDIKQNENRQTEVQQNESKRMESKHNESKQIEAKHESKHESKQTEVKQ
NESRQIEAKQNEGKQNNGKQEIRQRPETPKQKNEGRPETPKQKNEGRPETPKQKNEGRPE
TPKQKNEGRPETPKQKNEGRPETPKQKNEGRPETPKQKNEGRPETPKQKNEGRPETPKHR
HDNRRDSGKPSSEKKSEISRHKQDVKCDPSRVKSESRSDPTKQRPDGRSVPETPRRDHDS
LKQKPEDRSESERYRGDPSKIRRPEYLRSSNKSEHDSKHGIKPDSSKAEKLERKHRHESG
EPRERLSSGEQKSRPDSPRIKQESKGDSSKSRPDKPGFKSPNSKDERRTEGNKSKVDSNK
AHTDNKAEFPSYLLGGRSGALKHFVIPKIKRDKDGNVTQESRKTEIKSEHKDKVEKIGLV
EDLNKGAKPVVVLQKLSLDDVQKFIKDREEKSRSSCFKPNKNKSSKSNKGSIDQSVLKEL
PPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDR
DDDKAWEYEERDRRSSGDHRRSGHYHEGRRTSGGSRYRNRSPEDSDMDDYSPPPSLSEVA
RKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDDEIPQ
ELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDT
EDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLY
PQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDT
TILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRS
LRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEESNKKVDQDVLITN
SYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLG
RLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVSSKMDQGSIARILKQVSGGEDEIQ
QLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAMKSQKDDEASEGTHHAKD
VEATGQIMHRAESRKKFLRTIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQS
FDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVRE
AAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMC
VKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAMTRKILNITDVVAACRDTGYDWFE
QLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLADSDNKGVNSGRLVACITTL
FLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATI
EEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPN
STILTANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQ
TKAIIGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQ
QADRDWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTL
NQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQ
AINTCPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLL
YIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKTKKKERKPSSDEESE
SDSNSGSGSESEEEVSKPRKLRKRVDSDSDSDEENDINAVMKCLPENSTPLIEFANVSQG
ILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMA
HSKITEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNN
AAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELATQMNESVDVMDVIAICCPKYKDRPQ
IARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANK
LTNKVVQTLRSLYAAKDGTSS
NT seq
8526 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtctcaca
gaccttttgaaccagctgcctcttccatcgcctttacctgctacaacaacaaaaagtctg
ctttttaatggacgaatagcagaagaggtgaactgccttttggcctgtagggatgaaaat
ctggtttcacaactcgtacacagcctcaaccaggtgtcaacagaccatatagaactgaaa
gataaccttggcagcgatgatccagagggagatataccagtcttgctgcaggctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagt
ggaatgatgatgccgcagtataaactctctcagaattccatgcatggtagtcctgcatct
tccaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttatggcacaacagaatagcccagtgcctagtccatatgct
cctcaaagccctgcgggatacatgccatattcacatcctccaagttacacaccacatccc
cagatgcaacaagcttcagtatcgagtcccattgtctcaggtgggatgaggaacatacat
gaaaataaagtttcaagtcagttgtctggcaattcagctaatcaccatgctgataatact
agacatggctcaaatgaagactacctacagatggtgcacagactaagtagtgatgatggt
gatccttccataagaaatgctgcatcgttttctttaagatcaccacagtcggtatgctct
ccagctggaagtgatggaacccctaaaggatcaagaccacctttaatcctacagtctcag
cctccaccttattcatcacctagagatgtacccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagttctccttccaaggactccactaaacttacgtta
agactctctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcaatgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccattactccacaggatgttaaccgcccgctaaatgctgctcagtgtttg
ccacagcatgaacagacagcatttcttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaaccggtttca
cagcaaggaactattacgccatatgatgaagtagaattggatgcattggctgaaattgaa
cggatagaacgtgaatcagccattgaaagggagcgattttcaaaagaagtgcaagataaa
gataaacctttgaagaagcgaaaacaagattcttatccacaggaggctgggggtgctact
ggaggaaatagaccagcttctcaggagacaggttcagcaggaaatgggtcaaagccagca
ctgctggttagtattaatcttcaacaagcaggacgagtggattctcaggcaactgtaact
caggattcagataccatcaaaaaacctgaagaaataaaacagtgtaatgatggatctatt
tttgttcctcaagaagacactgttggagttcttaaactcaaacctgaaaaccatcctgag
acccttagaaaaaagttggattctgagggtcaaaagacagatattaaacaaaatgaaaac
agacagacagaagtacaacaaaatgagagcaagcggatggaaagtaaacacaatgaaagc
aaacagatagaagctaaacatgaaagcaagcatgagagcaagcagacagaggtgaaacaa
aatgaaagcagacagatagaagcaaagcaaaatgagggaaagcaaaacaacggcaaacag
gaaatacggcagcggcctgagacgccaaagcagaagaatgaaggcaggccggaaacgcca
aagcagaagaatgaaggcaggccagaaacaccaaagcagaagaatgaaggcaggccggaa
acgccaaagcagaagaatgaaggcaggccagaaacaccaaagcagaagaatgaaggcagg
ccggaaacgccaaagcagaagaatgaaggcaggccagaaacaccaaagcagaagaatgaa
ggcaggccggaaacgccaaagcagaaaaatgaaggtaggccggaaacgccaaaacacaga
catgacaataggagggactctggtaaaccatcttcggaaaagaaatctgaaatatccaga
cataaacaggatgttaaatgtgatccctctagggtaaaatctgaaagtagatcagatcca
acaaaacaaagacctgatggacgttcagttcctgagacaccaaggcgtgaccacgatagc
cttaaacaaaagcctgaagacagaagtgaatcagaaagatacaggggagatccatctaag
attagaagacctgaatatttaagatcctcaaacaaaagcgaacatgattctaagcatggc
attaaacctgatagttcaaaagctgagaaactggaaagaaaacatagacatgagtccggc
gagccaagagagaggctttcttctggggaacagaaatcacgacctgacagtcctcgtatt
aaacaggaaagtaaaggagattccagtaaatcaagacctgataaacctggttttaaatca
ccaaacagcaaggatgagcgaaggacagagggtaataagagtaaagtagatagtaataaa
gcacatactgacaataaagcagagtttcccagttatttgttggggggaagatctggtgca
ttgaaacattttgtcattcccaaaatcaagcgtgataaggatgggaatgtcactcaggag
tcgaggaaaactgaaattaagagtgaacataaggacaaagtagagaagattgggctagtc
gaagatctgaataagggagctaagccagtagttgtccttcagaaactttctttggatgat
gtacaaaaatttattaaggatagagaagaaaaatcaaggagctcttgttttaaacctaat
aagaacaagtcatccaaatcgaataaaggtagcatagatcagtcagtgttaaaggagttg
cctcctgagctcctggcagaaattgaatccaccatgccactttgtgaacgtgtgaaaatg
aacaaacgcaagcgtagcacagttaatgaaaaaccaaaatatgctgaaatcagttctgat
gaagacaatgacagtgaagaagcttttgaatcttctcggaaaagacataaaaaggacaga
gatgatgataaagcctgggagtacgaagagcgtgatagaagaagttcgggtgatcatagg
aggagtggtcattatcacgaaggacgaaggacttctggtggtagtcgctatcgcaatcgc
agtccagaagactcggacatggatgattattctcctcctcctagcctcagtgaagtggct
agaaaaatgaagaaaaaagaaaagcaaaagaaaaggaaagcttatgaacctaaattaacc
cctgaagaaatgatggattcttcaacttttaaacggtttactgcttcaattgaaaatatt
ttggaaaacttggaagacatggattttactgcctttggtgatgatgatgagattccacag
gagttgctactgggaaaacatcagcttaacgaactgggtagtgaatctgcgaaaattaag
gcaatgggcattatggacaagctgtcaacagataaaacagtgaaagtcctgaacatcttg
gaaaagaatattcaagatggctcgaagctttcaacattactaaatcataacaatgacact
gaagatgaggaaagattgtggagagatcttattatggagagagtcacaaaatccgctgat
gcttgccttacagctatcaacattatgacatcacccaatatgcctaaagctgtatatatt
gaggatgtaatagaaagagttattcagtacactaaatttcatctgcagaacacactttat
cctcagtatgatcctgtttacagggtggatccccatggtggaggcgtgttaagttcaaaa
gcaaagcgtgccaagtgttccacccacaaacagagggttattgtgatgctttataacaaa
gtttgtgacattgttagcagtttgtcagagttgctagagatacaactcctcactgataca
actatacttcaggtatcatcaatggggataacacctttttttgtagaaaatgtcagtgaa
ctccagttatgcgccatcaaactagtgactgcagttttctcaaggtatgaaaaacataga
caattgatactggaagaaattttcacttcacttgcaagactaccaaccagcaagagaagt
ttgagaaatttcagattaaacagtagtgatgttgatggggagcctatgtatattcaaatg
gtgactgcacttgttctgcaacttattcaatgcgttgtgcacctaccatcagcagaaaaa
gattcaaattcagaagaggagtcaaacaaaaaagtggatcaagatgtccttataactaac
tcctacgaaacagctatgagaactgcccagaacttcctttccatttttcttaagaagtgt
ggtagtaagcaaggggaggaggattacaggccactgtttgagaactttattcaagatctt
ctttctacagtcaacaaaccagaatggccagcagctgaattgctcctcagcttattagga
agactgttggttcatcaattcagtaacaagtctacagaaatggctttgcgggtggcatca
ctcgattatcttgggactgtagctgcaagattaaggaaggatgcagtctctagcaaaatg
gatcaaggatccattgcccgaatcttgaaacaggtttcaggaggagaggatgagatccaa
caactgcaaaaggcattgctggattatttggatgaaaacacagagacagatgcatcatta
gtgttttccaggaagttttatatagcacagtggttccgtgacacaacaatggagacagag
aaagcaatgaaatctcagaaggatgatgaagcatctgaaggaactcaccatgccaaggat
gttgaggcaacaggacaaataatgcacagagcagaaagtcgtaaaaaatttcttcgtacc
atcattaaaactgcaccatctcaattcagtacattaaagatgaattctgatactgtggac
tatgaagatgcttgcttgattgttcgctacttggcctctatgaggccgtttgcccagagc
ttcgatatttatttgacacagattctacgtgtacttggtgaaaatgcaattgctgttcga
acaaaagccatgaagtgtttgtctgaggttgttgctgtagaccccagcattctagccagg
ctggatatgcagcgaggtgttcatggacggttaatggataattccactagtgtacgagaa
gcagctgtggagttgcttggccggtttgtgctctgtcgccctcagcttgctgaacagtat
tatgacatgctgattgagcgaatactggataccggtatcagtgtcagaaagagagtcata
aagattttaagggacatctgcattgaacaaccaacatttcccaagattacagagatgtgt
gtgaaaatgattcgaagagtcaatgatgaagagggcattaagaaactggtgaatgagaca
ttccagaagctctggtttactccaactccacacaatgacaaagaagccatgaccaggaaa
atattaaacatcactgatgtggttgcagcttgtagagatacagggtatgactggtttgaa
caacttcttcaaaatctgctgaagtcagaagaggatgcttcatataaacctgtcaagaaa
gcctgtactcagcttgttgataatctggttgaacacattcttaaatatgaggaatctcta
gcagactcggacaacaaaggtgtgaattccggtcgcttggtagcttgcataaccactttg
ttcttattcagcaaaatcaggccccagctaatggtcaaacatgccatgacaatgcagcca
taccttaccactaaatgtagtacacagaatgatttcatggtgatctgtaatgttgcaaaa
atcttggagctggtagtgccactaatggaacatcccagtgagaccttccttgccactatt
gaggaagatctcatgaaactcatcatcaaatatggcatgacagttgtgcagcactgtgtg
agctgtcttggggctgttgtaaacaaggttactcaaaattataaatttgtgtgggcttgt
tttaatagatactatggtgcactttcaaaattaaaaagtcaacaccaagaagacccaaac
agtacaatacttacagccaataaaccagcactccttagatccctttttactgttggagca
ctatgtcggcattttgattttgatcaggaagattttaagggtaacagtaaggttaacatt
aaggataaagtacttgaactgctgatgtattttacaaaacattcagatgaagaggtacaa
acaaaagccattattggtctaggatttgcatttatacaacatccaagtctaatgtttgag
caggaagtgaagactctgtacaatagtattctttctgataagaactgctcagtcaactta
aaaatccaggtgttaaaaaacctccaaacctacttgcaggaagaggatacacgtatgcag
caggcagatagagactggaagaaagtagccaaacaggaggatctgaaagaaatgggtgat
atttcctcagggatgagcagttccatcatgcagctatatcttaaacaggtccttgaggct
ttctttcatacccagtccagtgtacgtcactttgctctaaatgtcattgcactgactctg
aaccagggtcttatccatcctgttcagtgtgttccatatttaattgcaatgggcacagat
ccagagcccgctatgcggaacaaagctgatcaacagctggtggaaatagacaaaaaatat
gctggattcattcatatgaaagcagtggctggtatgaagatgtcttaccaggtacaacag
gcaatcaatacatgcccaaaggatcctgtaaggggttttagacatgatgaatcctccagt
gctttgtgttcacatctgtactccatgattcgagggaaccgtcaacatagacgagccttt
cttatttctttactcaacctcttcgatgacacggcaaagacagaggtgaatatgctcttg
tatatagcagacaatctagcctgttttccttatcaaacacaggaagagccactgtttata
atgcatcatatagatattacactgtcagtttctggtagtaacctactacagtcatttaag
gagtctatggtaaagacaaaaaaaaaggagagaaaaccatcatcagatgaggagagtgag
agtgacagtaacagtgggagtgggagtgaaagtgaagaagaagttagcaagcctcgaaag
ttacggaaacgagtagactctgattcagattctgatgaagaaaatgatataaatgctgtg
atgaaatgtttgccagaaaattcaactcctttaattgaatttgcaaatgtctcacaaggc
atattactacttttgatgctaaaacagcatttaaagaacctctgtggattctctgatagt
aaaattcagaaatactctccctctgaatctgcaaaagtatacgataaagcgatcaacagg
aagacaggagtgcatttccatccaaaacagacgctggacttcctgcgaagcgatatggct
cattctaagatcactgaagaggtgaagaggagcatagtaaaacaatacttagatttcaag
cttcttatggaacatttggatcctgatgaagaggaagaagatggggaggtgtcagctagc
acaaatgctcggaacaaagcaattacctcgctgcttggaggaggcagccctaaaaacaat
gcagctgagacagaggacgatgaaagtgatggggaggatagaggaggaggcacttcaggg
tcattgagaaggtcaaaacgaaattcagactctacggagttggcaacacagatgaatgaa
agtgttgatgtcatggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacaa
attgcaagagtagtacagaaaaccagcaatggcttcagtgttcagtggatggcaggctcc
tacagtggctcctggactgaggctaagcgccgtgatggtcgcaaactggtgccttgggta
gacactattaaagagtcagacattatttacaaaaagattgctctaacgagtgctaataag
ctgactaataaagttgttcagactttacgatcgctgtatgccgccaaggatggaacttcc
agctaa
DBGET
integrated database retrieval system
