Gavialis gangeticus (Gharial): 109297918
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Entry
109297918 CDS
T07453
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ggn03041
]
109297918 (ZFR)
Spliceosome [BR:
ggn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109297918 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
109297918
NCBI-ProteinID:
XP_019373542
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTG
TTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKAS
QNTSNSSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEP
NVVTQATSSASTSASKPAASASNIATSSNTVNSSIASSAVKILTPTTNTPLNTVSNNKTS
TVAANIAVKKISTPKINFVGKYRSGNKLQTTNKLDEMKAAENVKTTPVATVQTQEVKPDA
TSEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGR
RHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEE
DMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSDD
RYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDSMTDHEKSKNKEGDDKKDGSKDRA
LKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIKC
AVPEAAIILNSCVEPKMQVTITLTSPIIREENMRDGDVTSGMVKDPPDVLDRQKCLDALA
ALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASGPQSP
GDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFR
QIHKVLGMDPLPQMNQRFNIHSNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccggtggtttccttcacctatgtgcccagccggctgggggaagat
gccaaaatggccaccggcaactactttgggttcacccacagcggggctgctgcccagtac
agccagcagccagcttcgggtgtagcctattcccatccaactacagttgctagctacact
gttcatcaggctccggtagctgcgcacacagttactgctgcctatgcgccagcagcagca
acagttgctgtagcgaggcctgctccagtagctgttgcagctgctgcaacagctgctgcc
tatggaggttaccctacggcgcacacagcaacagattatggttatacccagaggcaacaa
gaagctccaccaccaccacctccagtcactacacaaaactaccaggactcctactcatat
gtcagatctactgccccagctgtagcttatgacagcaagcagtactatcaacaaccaaca
gcaactgcagctgcagtggctgctgctgcccagcctcagccttccgtagccgaatcgtac
taccagacagctccaaaagcaggatacagccaaggagctactcagtatactcaagcacag
caaactcgacaagtgacagccataaaaccagccaccccaagtccagctacaactacattc
tctatatatccagtatcctccactgtgcaaccagtggcagctgcagctactgttgttcca
tcctatactcaaagcgctacatacagtacgacagcagttacttattctggtacctcttat
tctggctatgaagctgcagtatattcagctgcatcatcctattatcagcagcagcaacaa
caacagaaacaggcagcagcagcagcagctgctgctgctgcaacagccgcctggacaggg
accacctttactaaaaaggcaccattccaaaataagcaattgaaaccaaaacagcctccc
aagccaccccagatccactattgtgatgtctgtaagatcagctgtgctggaccacagact
tataaagagcacttggaaggccagaaacacaaaaagaaagaagcagccttaaaagcatct
cagaacaccagcaacagcagcacatctgctcgtggaacacagaatcagttgcgctgtgag
ctctgtgatgtgtcttgtacaggagcagatgcatatgctgcccatattcgtggagccaag
catcagaaagtggttaagttgcacacaaaactgggcaaacccattccttcaactgaacca
aatgttgtcacccaggctacttcttcagcatccacatctgcttccaaaccagctgcctcc
gcttcaaatattgcaactagcagcaacactgtgaactcctccattgcatcttcagcagtg
aaaattcttactcccacaacaaacacaccacttaacacagtatccaacaacaaaacatct
acagttgctgctaatattgctgtaaagaaaatatctacaccgaaaataaactttgttggc
aagtacagaagtggtaataaactacaaacaacaaacaaactggatgaaatgaaagccgct
gaaaatgttaagaccactcctgttgctacagtacagacacaagaagttaaaccagatgca
acatctgaaccagtaacacccacaactcttgctgctttacagagtgatgttcagcctgtg
ggtcatgactatgtggaagaggtgcggaatgatgaaggaaaagtgatccgcttccactgc
aaactttgtgaatgcagttttaatgatcctaatgccaaggagatgcatctaaaaggaagg
cggcacagacttcagtataaaaaaaaagtaaatccagatttgcaagtagaagtaaaacct
agtatcagagcaaggaaaattcaagaagagaagatgagaaagcaaatgcaaaaagaagaa
tattggagaagacgagaagaggaagagcgctggaggatggaaatgagacgctatgaagag
gacatgtactggaggaggatggaagaggagcaacatcattgggatgaccgtcgcagaata
cctgatgggggatatcctcatggtcctcctggacctctaggcctactgggagttagacca
ggaatgccacctcagccccagggaccagctcctctacgccgcccagattcatctgatgac
cgttacgtaatgacaaaacatgcagctatttatccaactgaggaagaacttcaggcagtt
caaaaaatagtttccattacagagcgtgctctgaaacttgtgtctgacagcatgactgac
catgaaaaaagtaagaacaaagaaggagatgataaaaaagatggcagtaaagacagagcc
ttgaaaggagttttacgagtaggagttttagctaaaggcttgcttctccgtggagaccgg
aacgttaaccttgttttgctgtgtgctgagaaaccttcaaagacattactcagtcgtatt
gcagaaagtcttcccaagcaacttgcagtgataagtcctgagaagtatgacataaagtgt
gcagttccagaagcagctataatattgaattcatgtgtggaacccaaaatgcaagttact
atcacactgacatctccaatcattcgtgaggagaacatgagggatggagatgtaacctcg
ggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctggct
gctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtgatt
atcatacgtattcttcgtgacctctgtcagcgagttccaacttggtctgactttccaagc
tgggctatggaattattagtagagaaggcaatcagcagtgcttctggaccgcaaagccca
ggtgacgcactgagaagagtttttgagtgtatatcttcaggcatcatcctgaaaggcggt
cctggccttctggatccttgtgaaaaagatccttttgatacacttgctgtaatgacagac
cagcaaagagaggatattacttcaagtgcacagtttgcattgagacttcttgcattccgt
cagatacacaaagttttaggaatggatccattgccgcagatgaaccaacgtttcaacatc
catagcaaccgtaaaaggagaagggacagtgatggagttgatggctttgaagcagagggg
aaaaaagacaaaaaagattatgataacttttaa
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integrated database retrieval system
