Gavialis gangeticus (Gharial): 109297920
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Entry
109297920 CDS
T07453
Symbol
PDZD2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
109297920 (PDZD2)
Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
109297920 (PDZD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109297920
NCBI-ProteinID:
XP_019373547
LinkDB
All DBs
Position
Unknown
AA seq
2708 aa
AA seq
DB search
MPITQENALLFLPLLCQWLQNNLREEVEGSEQRLCHSAIQKLREYIQLTFSVDESKLQHG
SPSTLDMEICSVHLTKEVEKAEALGLSFGNIPAFGDYGEKQRGGRKRKGHKGPVLDVGCI
WVTDLKKNSPAGRCGKVRLRDEILSLNGQLMVGVDVSGASYLAEQCWNGGFIYLIMLRRI
KRKAPLPPSNGNNSNSCEPKAKPTSELSDRTTQNGKRTRKFGVIARTSASKDGKESKGSQ
TSENENGQYPPMEVDAPQPEASEMESSTEEQFQSKGQYRSRLSDGSIPDFRAGDLPTQRE
GCRIWKMHIVKGTDGLGIQITGGRGSKRSPHGIIVAHVEEGGSAHRDGRLTSGDELLMIN
SQSLVGLSHLEAVALLRSAVGLVQLVVASRETTEADCLKYPSTSLPDLLSSCAVQDTVSF
TDNKENEKPEEEDIKGGSTSPEVQGAVTETDKSQDPACVEASKDNSQSPNMGSGILKYRS
RSQGAGSRLESVGEDDELTVENGESSYEIAVKFSRGGRKHSLPQQLEGAGSRQDYHIVKK
STRSLSAAQVESPWRLTQPSIISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVKTIFPN
GAAAADGRLKEGDEILEVNGESLQGLTHQEAIQTFKQLKKGVVTLTVRTRLRSPSLTPCA
TPTLLSRSSSPSSSASGGTPVAGSEDGDSSSSCRKGPGPKDRIVMDVTLNKEPGVGLGIG
ACCLTLENSSPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSLRHAALSEAYAILSECG
PGPVSLIISRHPNPKVSEQEMDEAIARTTLRDSKDASSSPVMGSVQKSPSPSMKARQGEP
SSPLSWTMKRFLEPASRQGSVSSETELSQYFSQDGPSQLSFSDAVVTGFSDEEQLRQKSG
SSSLDDSSLPPSNLTPKEAGTMKAGSLASPSNGKPPCLLNRHMECVRQGSLSSSPKYVRS
PFLRQRRVVFYDGDVSDEDEDAHFQRGQGNKGQKITEKDCDIVIATSSVEIDDESQDGEL
PRHIGSEASTPLYGNSLESEDSTLEQIDSPFFPIKAFDYSSMPEFRPGNLCVKELREAQL
ESKRSPKLEHKAVTRVKSMMSTECRSLPRQKIEEHSLCDKPVARVPPHSKKTGPDSSEQS
NVEIVTLVRNEDESFGLDLEIQATPLRIMITGLRPGGAAEKDSEGKLAVGDEISSINSAP
VSGMTYEEICLLMQNLPTYVTFGVQKAVPDVDRLTNLNMLSGPDAQPSSNVVAEEGIASG
KLEKGTFRSDGVDLVTERTMLPPSATTKEVQVGSSEISCAEVSAVIPITDIDDLLSKLNS
SEDRSSQSPPRAVSPIRKECTAKHNCGTEEGCPTNSEPEMVTNEVSEKTINYASNAQGIL
GLSVLDSIKTGKLFTVNKNCLNNYSRNFSSLSEDSYSGADSVEDSRNSPFLKSMYGAAED
SHSDTESLTEAPDAPGDVLLLPSVADNASGACNVTESDEEQIEICCMNNKLQESAQEQWL
ASAASLPQPFPPHIAKVSQAEDCTGHGSPDTKLHKPLCLPEDQGCPIPPRHLNTENILPS
TSLLSPSSDTLPDKDTLKSSVACAFHNNGALSTEDRLSLEISEKSVESCESVQDDASLQC
ERIGSCVSRSGNSLEIHLLDKEHPDKEEGSKFERELAADDCSHTVGYHSLLVKKETNSLA
NLYKAEDNHVHSLLQRVTSRSTLSPKSKDLSKTSTAPDLSEKNEKVNGVTSGRGSNAKIQ
SSSTNHVKGVTVPHTPSSQKKSHQESKGIAQKHVVEALLNNQRAKTGQKLKSLSIKSKPK
ANAEPPSPNPAKSSGIDQRRISVSPQLSPKLLIKKASVSHNMPTNTEPGKSFSTASKALK
SEHENKLSLLACKETFSPLLNGDSSPKQSSDTKTNGNVELNVSGESEHQRGCGKQNERPA
SVQCEEKGGKMNGDIFKTKEDQFKVTMSPKGTPKSEHAKKKVENHGTGLNLINSYYREGN
VKPFGPHIIGVSNKDSSSLRSSPIQQEQPEGQEIQRTFIEVRLSSSSSSSSLAPSSQLLL
LEKAEDSNKKISHWIEELGTAQYFTRIDAVGSGSLYCGSKPVSRTYSVPAQLSGHLREDG
AIIGVPADHMQDLQSHVAGEKCTQKEPDTLKIVHLNMLNGQSTQSEREQAYTSKSIPKPS
LEEQPLANENSCSVIDKQKPLRRNYYYYELNWPHDPTSSFSVKQRIKSFENLAHFDRSVK
AVDIHSTSSGSKSPVGRRSSSGITSIAPASPSDAVRALRRSLSSYGDGQSNIPPSPQLTK
SSTNIDLAQVQKNSTEGSKDDANLKKSKGEGTSGDLNVLLPPVSHMRRSRGHCRQLMSRS
KLRELRALSMPDLDKLCDEDFSVEPKTTHFKTELEITPRRSLGLPAESGASPALSNLAKL
NRLSSRGSAPWTSGSGTPGFASDDEVPHDSYLGQKHSGKSWSISLDQLLVSTLDQQKLQS
VLSSVMAKCDVITMLQEVKMQAENKEDAYFVVLSKEEGAGLGFSVAGGIDLEQKSVVVHR
VFSKGVASEEGTIHRGDLVLSINGMCLMDSLHGDVLNALHQARLHKYAVIVIKKEKDRGK
DSSRLEITAPGRKCFGPGKDVTLDIGGTGLNMDINDVVCIELLKTSAGLGFSLDGGKASV
SGDRPLLVKRIFKGGAAEQAGKIEAGDEILAISGKSLLGLMHYDAWNIIKSVPEGPVQLL
IKKPRTSV
NT seq
8127 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcaagaaaatgctctgctctttctccccctcctgtgtcagtggctgcaa
aacaacctgcgggaggaggtggaagggtcagagcagaggctgtgtcattctgccattcag
aagctaagagagtacattcagttgactttttctgtggatgagagcaaactgcagcatggc
agtcccagcactttagacatggaaatctgctctgtacacctaaccaaggaggtggagaag
gctgaggcacttgggttaagttttggaaacattcctgcttttggagactatggagagaaa
cagagaggaggaagaaagaggaaggggcataaaggtcccgtgttggatgtaggatgtatc
tgggtaactgatttaaagaaaaacagcccagcggggagatgtgggaaagtgcgactgaga
gatgagattctttcactgaatggacagctaatggttggcgtggatgtcagtggggcaagt
tacttggctgagcagtgctggaatggcggcttcatctacctgatcatgttgcgtcgcatt
aagcgcaaagcccctcttcctccatcaaatggcaacaacagcaatagctgtgaacccaaa
gcaaagcctacctcagaactgagtgacagaaccactcaaaatgggaaacgcacgagaaag
tttggggtcattgccagaacatcagccagtaaagatggcaaggaaagcaaaggcagccag
acatcagagaatgagaatggacaatacccccctatggaggtggatgctccacagccagag
gcatcagagatggagagcagcacggaggaacagtttcaaagcaaaggacagtataggtct
cgtctttccgacggcagcattccagacttcagagcaggtgacctgcctacacagcgagaa
ggttgccgcatatggaagatgcacatagtgaaggggacagacggcctgggaatccagatt
acaggaggccgagggtcgaagcgatcacctcacggcatcattgttgcgcatgtggaagaa
ggaggctctgcacacagggatggtagattgacatcaggtgatgagctcctaatgatcaac
agtcaatccttggttggactttcgcatctggaagccgtggccctccttcgatcggcagtt
ggtctagtgcagttggtggtggcaagcagggaaactactgaagcagactgtctcaagtat
ccatctaccagtttgccagacttgcttagcagctgtgcagtccaagataccgtgtctttc
actgataacaaagagaatgaaaaaccagaggaggaagatatcaaaggagggagtacatct
cccgaagttcagggtgctgtgacagaaacagataaatctcaagatcctgcgtgtgtggaa
gcatccaaagataacagccaaagcccaaatatggggagtggcatattgaaatacagaagc
cgatcccaaggagctgggtctcgcttagaatctgtgggtgaagatgatgaactgacagtg
gaaaatggtgaatccagctatgaaatagcagtgaaattttcccgcggagggagaaaacat
tctctccctcagcagcttgaaggagcaggatctcggcaggattaccatattgtgaagaaa
tctacccgctctttgagtgctgctcaggtggaatctccatggagactgacccaaccttcc
attatttccaacattgtcctaatgaaaggacaagggaagggtcttgggttcagcattgtg
ggaggccaagattctgctcgcggccgcatgggaatttttgtgaagactatattcccaaat
ggggcagctgctgctgatggaagactcaaagaaggggatgaaatcttagaagttaatgga
gaatccttacaagggctgacccatcaggaagccattcagacatttaagcaactcaagaaa
ggtgttgtgaccctcactgtacgcacgagactgcgcagcccaagcctcaccccgtgtgca
acacccactttattgagccgctccagctcccccagctccagtgctagtggaggaacccca
gtagctggctctgaagatggagacagttcatcttcatgtcgcaagggcccaggaccaaag
gacaggattgtcatggatgtgactctcaacaaagagccaggggttgggttaggcattggt
gcctgttgtctcacgctggaaaatagctctccagggatctacattcacagcctggcccca
ggatcagtggctaagatggatggtagattaagtcgcggcgaccagattctggaggcagat
tcagtgagtctacgccatgcggcattaagtgaagcctacgccattttgagtgaatgtggt
ccaggtccagttagccttatcattagccggcatcccaacccaaaggtttctgaacaggag
atggatgaagcaatagcccgcaccactctgcgtgacagcaaggatgccagttcctctcct
gtcatggggtctgtgcaaaagagtccatcccctagcatgaaggccaggcaaggagagccc
tcgtcacctctcagctggacaatgaaacgcttcctggagccagcaagtcggcagggatct
gtcagttctgaaacggagctttctcagtacttctcacaagatggcccaagccagctgtca
ttttctgatgctgtagtaacaggcttcagtgatgaagagcagctccgtcagaagagtgga
agcagctctctggatgacagctctcttcctcccagcaatctaactcccaaagaagcagga
accatgaaagcgggtagccttgcttctccaagcaatggaaagccgccttgtcttctcaac
aggcacatggaatgtgtccgacagggtagccttagtagcagtcccaagtatgtccggagc
ccgtttctgcgacagaggagggttgttttctatgatggtgatgttagtgatgaggatgaa
gacgcccactttcaaaggggacaggggaacaagggccagaaaatcactgagaaagactgt
gatattgtcatcgccacctcttcagttgaaattgatgacgagagtcaggatggtgaatta
cctcgacacattggcagtgaagcatctactcctctctatggcaactccctggagtctgag
gatagcactctggagcaaatagactctcccttctttccaatcaaagcatttgattactca
agcatgcctgagtttcgccctggtaatctgtgcgtgaaggagctccgagaggcacagctt
gaatcaaagagatctcctaagctggagcacaaagcagtcacaagagtaaaaagtatgatg
agcactgagtgccgtagtcttccgaggcagaagattgaggagcacagtctctgtgataag
cctgttgcaagggtacctcctcatagcaaaaagactggtcccgacagctctgagcagagc
aatgttgaaatagtgactctggttcggaatgaagatgaatcctttggactggatttggaa
atccaagccacacctttaagaattatgataacaggcttaaggccaggaggagcagctgag
aaggactcggagggaaagctggctgtaggagatgagatttcttccatcaacagtgcccct
gtcagtggaatgacatatgaggaaatctgtctgcttatgcagaatctccccacgtatgtg
acatttggggtgcagaaagcagtgccagatgtggacagacttacaaacctcaacatgctt
tcagggccagatgcccaacccagcagcaacgttgtagctgaagaaggaatagcatctggg
aaactagaaaaagggactttccggagtgatggtgtggaccttgtcacagaaagaacaatg
ctgccaccttccgccacgaccaaagaggtgcaagtaggttcttcagaaatcagctgtgct
gaggtcagtgctgtgattcccatcacggatattgatgacttgctcagcaaactgaattct
tcagaggacagaagctctcaatcgccaccaagagcagtgagccccattagaaaggagtgc
actgccaagcataactgtgggacagaagagggttgtcccactaattctgagccagagatg
gtgacgaatgaggtatctgaaaaaactatcaattatgcatctaatgcacaggggattttg
ggattatcagtgttggattccattaagacaggcaagctttttactgtgaataaaaactgt
ttaaataactattctaggaattttagcagtttgagtgaagacagttattctggagccgat
tctgtggaagacagcagaaacagcccgtttctaaagtctatgtatggtgctgcagaggac
tcccactcggacacagaatcactcacagaagctcctgatgctcctggagacgttttactt
ttgccatctgttgctgataatgcctcaggggcctgtaatgtgacagagtcagatgaggaa
caaattgaaatttgttgcatgaataataagctgcaagagtctgcccaggagcagtggctt
gcgtctgctgcaagcttaccccagccattcccaccacacattgcaaaagtttcacaagca
gaggattgtacaggacatggttcaccggatacaaagctccacaaacctctgtgtctacca
gaagatcaagggtgtcccattcccccacgtcatttaaatactgaaaatatacttccctcc
acttccttactctctccttcctcagatactttaccagataaagataccctaaaaagttca
gtagcttgtgctttccataacaatggtgccttaagtacagaagacaggctaagcttagag
atcagtgaaaagtctgtggagtcctgcgaatctgtacaagatgatgcatctttgcaatgt
gaaagaataggttcctgcgtgagtaggagtggtaacagcttggagatccatttgctagac
aaagaacaccctgacaaagaagagggatccaaatttgaaagagaattggcagctgatgat
tgcagtcacacagtcggttatcattctcttttggtgaagaaggaaacaaatagtttggct
aacctgtataaagcagaggataatcatgtccactctttattacaaagagttacatccagg
tcaaccctttctccaaaatcaaaagatctaagtaagactagcactgctcctgacttgtca
gagaaaaatgaaaaagttaatggtgtaacttcgggaaggggttctaatgcgaaaatccag
agttccagtacaaatcacgtcaaaggagtcactgtaccacatacgccttcttcacagaaa
aaatcacatcaggaatccaagggaatagcccaaaagcatgtagtagaagcactgttaaat
aaccagagagccaaaacaggacagaagctaaagagtctaagcatcaaaagtaaaccaaaa
gcaaatgcagaacctcctagccctaatcctgcaaaaagcagtgggattgatcagcgaagg
atttctgtttctccacagttatcacccaagcttctcataaagaaagcatcagtgtcccat
aacatgcctacaaacacagaacctggcaagagcttttcaacagcttcaaaggctcttaaa
tcagagcatgaaaataagctatctttacttgcatgtaaagaaacattttcccccttgctg
aatggtgacagcagcccaaagcagagtagtgacactaaaaccaatggcaatgttgagcta
aatgttagtggggaatcagaacaccagaggggatgtggaaagcaaaatgaaaggccagct
tcagtgcagtgtgaagaaaaaggtggtaagatgaatggtgatatttttaaaacaaaagaa
gatcagttcaaagtaaccatgtctcctaaaggtacaccaaaaagtgagcatgcaaaaaag
aaagtagagaatcatggaacaggtctgaacttgataaatagttattatagagaaggcaac
gtgaagccatttggtcctcacatcataggagtatctaacaaggactcttcctcattgagg
tcttccccaattcagcaggagcagccagaaggacaggaaattcaacgcaccttcattgaa
gtgaggctctcctcttcttcctcctcctcctcactggcaccatcttcacagctgctgctg
ttggaaaaggcagaagatagcaataaaaagatcagccactggatcgaggagctagggact
gcacagtatttcacaagaatagatgctgttgggagtggaagtctatactgtggatcaaaa
ccagtgtcaaggacttactcagtgccagctcagttatcaggtcacctgagggaagatggt
gccattataggtgttccagcagaccatatgcaagatcttcagagccacgttgcaggtgaa
aaatgcacccaaaaagagccagacacgttaaaaattgtccatttaaatatgctgaatggc
cagagcacccagagcgaaagagaacaggcatatacttccaaaagcatcccaaaaccaagc
cttgaggagcagcctttagccaatgaaaatagctgctctgttatagataaacaaaaacct
ttaagaagaaactattactattatgaactgaactggccacatgaccctacttcatctttt
tctgtcaaacagcgaatcaaatcctttgagaacctggcacactttgatagatctgttaaa
gctgtagacatacactccacctccagcggttctaagtcacctgttggcagaagatcttct
agtggtatcacttccattgcccctgccagtccaagtgatgcagtgcgggcactgagacga
agtttaagttcatacggcgatggtcagagcaacattccaccatctccacagctgacaaaa
tcatcaacaaatatagacttagcccaagtgcagaagaactcaacagaaggcagcaaagat
gatgcaaatttgaagaaaagcaagggtgaaggtacttcaggggatctgaatgtcttgctt
ccccctgtgtcccatatgcggagaagcagaggtcactgcaggcagttgatgtcccgctca
aagctcagggagctcagagcactgagcatgcctgatttggacaagctgtgtgatgaggac
ttttcagtggaacctaagaccactcatttcaaaactgaactggaaattacacctaggagg
tctcttggcctgcctgctgaaagtggtgcttctcctgccctttccaaccttgcgaagttg
aacaggctgtcttccagaggaagtgctccttggactagtggctcaggaactcctggcttc
gcatctgatgatgaagtaccacatgatagctacctaggtcagaaacactcaggaaaaagt
tggtcaatcagcttggatcagctattggtctcaactctggaccagcagaaattgcaatct
gttttatcatcagtgatggcaaaatgtgatgtcatcactatgctccaagaagttaaaatg
caggcagagaacaaagaagacgcttactttgtagtcctgagtaaagaagaaggagctggc
ctggggtttagtgtcgctggtggaatagatctggaacagaaatcagtcgtagtccacaga
gtgttttcaaagggtgtggcatctgaagaagggaccattcatcgaggagatctcgttttg
tcaatcaatggcatgtgtcttatggattcacttcatggagatgttctgaatgctctccat
caggccagactgcacaaatatgcagtcattgtcatcaagaaagaaaaagacagaggaaag
gattcttccagacttgaaataactgctcctggcagaaaatgctttgggcctggaaaggat
gttaccctggatataggaggaacaggcctaaatatggatataaatgatgttgtgtgtatt
gaattattgaaaacctctgctggcttgggattcagccttgatggtggaaaagcttcagtt
tctggagacagacctttgcttgtaaaaagaatatttaaaggtggtgctgcagagcaagct
ggaaaaatagaagctggagatgaaattcttgccattagtggaaagtcattacttggtctc
atgcactatgatgcctggaatatcattaaatctgtcccagagggacctgttcagttgctt
atcaagaagcctagaacttcagtatga
DBGET
integrated database retrieval system
