Gavialis gangeticus (Gharial): 109297945
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Entry
109297945 CDS
T07453
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04137
Mitophagy - animal
ggn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109297945 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109297945 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109297945 (VCP)
03009 Ribosome biogenesis [BR:
ggn03009
]
109297945 (VCP)
04131 Membrane trafficking [BR:
ggn04131
]
109297945 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggn04147
]
109297945 (VCP)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109297945 (VCP)
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109297945 (VCP)
Membrane trafficking [BR:
ggn04131
]
SNARE
SNARE associated proteins
Others
109297945 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109297945 (VCP)
Exosome [BR:
ggn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109297945 (VCP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
Viral_helicase1
NACHT
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
109297945
NCBI-ProteinID:
XP_019373583
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaagcagatgacttatcaactgcaattctgaagcagaag
aacaggcccaatcggttaattgttgatgaagccatcaatgaggacaacagtgttgtatca
ctgtcccaggcaaaaatggatgaattgcagctgttcagaggagacactgttttgctaaaa
ggaaagaagaggagagaggcagtctgcattgtcctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggtggttcgcaacaacctgcgagtgcgcctgggtgatgtgatc
agcatccagccttgcccagatgtgaagtacggcaaacgcatccatgtgctgccaatcgac
gacacagtagaggggatcacaggaaatctgtttgaggtctaccttaagccatacttcctg
gaagcatatagaccgatcagaaaaggggacatcttcttggtgcgtggagggatgcgtgcg
gtggagttcaaagtggtggagacagaccccagcccttattgcatagtggctccagatacc
gtgatccattgtgaaggggagcccatcaaacgagaggatgaggaggagtcgttgaatgaa
gtgggctacgatgacattggaggctgcaggaagcagctagctcagatcaaggagatggta
gagctgcctctcagacaccctgctctcttcaaggccattggtgtgaagcctccccgtggg
atactgctgtatggtccccctggcactggtaaaaccctgattgctcgtgcagtggccaat
gaaaccggagctttcttcttcctgatcaatggtcctgagattatgagcaagctggctgga
gagtcggagagcaacctgaggaaagcctttgaagaagctgaaaagaatgctcctgccatc
atcttcattgacgaactggatgccattgctccaaagagagagaagacacatggagaggtg
gaacgccgcatagtgtctcagctgctgactctgatggatggcctgaaacagagagcacat
gtgattgttatggcagcgaccaacagacctaacagcattgacccagccctcaggcgattt
ggtcgctttgacagagaggtagatattggtatccctgatgccacgggacgcctggaaatc
ctgcagatccacacaaagaacatgaagctggctgatgatgtggatttggagcaggtggcc
aacgagacccacggccatgtcggtgctgacttggctgctctctgctcagaagctgctctt
caggccatcaggaagaagatggatctcatagacttggaagacgaaaccattgatgctgaa
gtgatgaactccttggctgtcaccatggatgacttcaggtgggctctgagccagagcaac
ccctcagctctgcgggagacagtagttgaagtgccccaagttacctgggaggatattggt
ggcctagaggatgtcaagagagaactccaggagcttgtacagtatcctgtggagcaccca
gacaaattcctcaaattcggcatgactccctccaaaggggtcctgttctatgggccccct
ggctgtggtaagacactgctggctaaagccattgccaatgaatgccaggcaaacttcatc
tccatcaaggggccggagctgctcaccatgtggtttggtgaatccgaggccaatgtgcgc
gagatctttgacaaggcccgccaagcagctccctgtgtactcttcttcgatgagctggac
tccattgcaaaggcccgaggtgggaacattggggacggtggcggcgctgcagaccgtgtc
attaatcagatcctgaccgaaatggatggcatgtccaccaagaagaacgtattcatcatt
ggtgccaccaacaggccagacatcatcgatccagccattctgcgtcctggccgcctggat
cagctcatctacatccccctgcctgatgagaagtcccgggttgctatccttaaggccaac
ctgaggaagtcacctgttgccaaggacgtggatctggagttcctggctaagatgaccaac
ggtttttctggagctgacctgacggagatctgccagcgtgcctgcaaactggccatccgt
gagtccattgagagtgagatccggcgggagcgcgagaggcagaccaacccctcggccatg
gaagtggaggaggatgaccctgtccctgagatccgcagagaccactttgaggaggccatg
cgctttgctcgccgctccgtcagcgacaacgacatcaggaaatacgagatgtttgcacag
actctacagcagagccgtggcttcggcagcttcaggttcccatccggtaaccagggaggt
gctggcccaagccaaggcacgggaggtggcagcggcggcaacgtgtacagcgaagacaac
gatgatgacctctacgggtaa
DBGET
integrated database retrieval system
