Gavialis gangeticus (Gharial): 109297976
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Entry
109297976 CDS
T07453
Name
(RefSeq) interferon type B-like
KO
K05414
interferon alpha
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04060
Cytokine-cytokine receptor interaction
ggn04217
Necroptosis
ggn04620
Toll-like receptor signaling pathway
ggn04621
NOD-like receptor signaling pathway
ggn04622
RIG-I-like receptor signaling pathway
ggn04623
Cytosolic DNA-sensing pathway
ggn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109297976
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109297976
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109297976
04621 NOD-like receptor signaling pathway
109297976
04622 RIG-I-like receptor signaling pathway
109297976
04623 Cytosolic DNA-sensing pathway
109297976
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109297976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ggn04052
]
109297976
Cytokines and neuropeptides [BR:
ggn04052
]
Cytokines
Interferons
109297976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Interferon
CHD1-like_C
Motif
Other DBs
NCBI-GeneID:
109297976
NCBI-ProteinID:
XP_019373632
LinkDB
All DBs
Position
Unknown
AA seq
186 aa
AA seq
DB search
MACISIQAWGGLWQICLAALLLAHVTALDCSNLKDLQEVLNRNSVQLLGQVAGALPEECL
EDRPTFRFPEKVLRSKAPHNAWMATYEILQQLFSLFKRNLPETAWDTRSMERFLNAVHVQ
IKRLETCPPTNGLYPRSQNKAMKLKKYFRNIHDFLQEKNYSKCAWEVVRIEAKTWFYYLD
KFRNRL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcatctctattcaagcctgggggggcctgtggcagatctgcctggcggcacta
ttactggctcacgtcacggcgctggactgcagcaacttgaaagacctacaagaagtgctt
aacaggaacagcgtgcaactgctgggacaggtggctggagcacttcctgaggagtgcctg
gaggacaggcccaccttccggttccccgagaaggtcctgcggtccaaggctccacataac
gcctggatggcaacctatgaaatcctccagcagctcttcagtctctttaaaaggaatctc
cccgaaactgcctgggacacgcgcagcatggagaggttcctaaatgcggtccatgtccag
atcaagcggctcgagacatgcccgcctacaaacgggctctatccaagaagccaaaacaaa
gctatgaaactgaagaaatacttcagaaacatccacgattttctccaagagaagaactac
agcaagtgtgcatgggaggtggtccgaatagaagccaagacctggttttactatctggac
aagttcagaaacaggctgtaa
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