Gavialis gangeticus (Gharial): 109298039
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Entry
109298039 CDS
T07453
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109298039 (WDR7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109298039 (WDR7)
Membrane trafficking [BR:
ggn04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
109298039 (WDR7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
CFAP251_N
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
ANAPC4_WD40
Beta-prop_ACSF4
Beta-prop_IFT140_1st
PAC11
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_NOL10_N
WDR72_alpha-sol
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
LRS4
DNAI3_WD
Motif
Other DBs
NCBI-GeneID:
109298039
NCBI-ProteinID:
XP_019373714
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MAGNSLVLPIVLWGRKAPTHCISTLLLMDDVSMIVTGCHDGQICLWDLSLNLEINPRALL
FGHTASITCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFT
VGTQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIVTSEVSHIQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSVPSENGQTWAGGDFVSADKVIIWTEDGQSFIYKLPASCLPASDSFRSDV
GKAVENLIPPLLHSVLDRANKQLLICPPVTRFFYGRRGCFHKLLIQGDSSGRLCIWSVPN
TLEQQDIAEGLQMTVSTSLQEAFNKLTPHPAGIIDQLSLIPNNSEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRALRGHRNKITCLLYPHQVSSRY
DQKYLVSGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHQKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQGIKTNLTDPDIHILFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGTFRAGKRAAVLFQQVKETIKENIKEHLLDDDDEDEEAMRQRREDSDPEY
RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNDVLDDICLDRLGMLKPHCSVSFGLLSR
GGHMSLMLPSYNQSMGKPSYDGVELTRKMSVTEGLGRGTYGVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPELSKVKTPPPPVSSPAAQGQIKQGWSQLAAMHC
VMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKETIDAWAP
YLPQYIDSVISPGVTAEAIQTGTASPDSSSTEAKVQEEEHDLVDDDITAGCLSSLPQIKK
ISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLA
RHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADA
EKQLANITMGLPLNPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQ
NIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPA
ICRFYMVSYYERSHRIAVGARHGSVALYDIRTGKCQVNKSL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaatagccttgttctacctatagtcctttggggtcgcaaagcaccaacgcac
tgcatatcaacccttctgttaatggacgatgtgtcaatgattgtcactggatgccatgat
ggacagatatgtctctgggacctttcattaaatctggagattaatcccagagctttgttg
tttggtcatacagcctcaattacttgtttgtccaaggcctctgcctccagtgaaaaacag
tatatagtgagtgcatctgaaagcggggagatgtgtctctgggatgtgaatgatgggaga
tgcatagaatttactaaattagcctgcacacacactggcatacagttctatcagtttaca
gttgggactcaacgtgaagggaggctgctttgccatgggcattatccagaaattcttgtt
gtggatgctaccagccttgaggtcctatattctttagtgtcaaagatttctcctgactgg
atcagctctatgagtatcattaggtcccacagaacacaagaggatactgttgtggcagtt
tcagtgactggtattctgaaagtatggattgtaacttctgaagttagtcacattcaagat
acagaaccaatatttgaagaggagtctaaaccaatttattgtcagaactgccaaagtatt
tccttctgtgcatttacccagagatctcttttggtagtatgctcaaagtactggagggtg
tttgatgctggagattattccctgttatgttcagttcccagtgagaatggacagacctgg
gctggtggtgactttgtatcggctgataaagtgatcatatggacagaagatggccaaagt
tttatttacaaactaccagccagttgcctgccagctagtgattcatttcgcagtgatgtt
ggcaaagctgttgaaaacttaattcctcctttgctgcacagtgtattggacagagcaaat
aagcagttactaatttgtcctcctgtcactcggttcttctatggacgcagaggatgtttc
cataaacttctaatccaaggagactcttcagggagactgtgtatttggagtgtgccaaat
acccttgagcaacaagacattgctgaagggttgcagatgacagtttcaacttccttgcaa
gaagcttttaataaactcactcctcatcctgctggaattatcgatcaattgagtttaata
ccaaacaacagtgaaccactcaaagttacagctagtgtgtatattccagcacatggacgc
ctggtttgtggtcgtgaagatggaagcattattattgtgccagcaacacaaactgctata
gttcagcttcttcaaggagagcacatgctcaggagaggttggccacctcacagagctctc
agaggtcatcgtaacaaaatcacatgtttactgtaccctcatcaggtttcatctcgttat
gaccaaaaatatttggtatcaggtggtgtggatttttcagtcattatatgggacatattt
tctggcgaaatgaaacatattttctgcgtgcatggcggagagataacgcagctcctagtt
ccaccggaaaattgtagtgcaagagtccagcactgcatttgctctgttgccagtgaccac
tcagtaggacttctgagtctgcgagagaaaaaatgcatcatgcttgcttctcgtcatctt
ttccctattcaagtaattaagtggagaccttcagatgattacctggtggtaggatgttca
gatggatctgtatatgtctggcaaatggacactggtgcactggatcgttgtgtgatggga
ataacagcagttgagatcttgaatgcttgtgatgaggcagttcctgctgcagtagactcc
ctcagtcacccagctgtaaacctaaaacaggccatgactagacgtagcctcgctgcttta
aaaaatatggcccaccagaaattacagacccttgccactaaccttctggcttctgaagct
tctgacaaagggaatttgcctaaatattcacataactctctgatggttcaaggtataaag
actaacctaacagacccggatatccacatcctcttctttgatgtagaagctctgattatt
cagctactgacagaagaagcgtctaggcctaacactgcacttatttccccagagaattta
cagaaagcatctggcagttctgacaaggggggcacttttcgggctggcaaacgagcagca
gttctcttccagcaggtcaaggaaacaatcaaagagaacataaaagaacatcttctagat
gatgatgatgaggatgaagaagcaatgaggcagagaagagaagacagtgacccagaatat
cgctccagcaaatctaaaccattaaccctgttagaatataatcttaccatggacacagca
aaactttttatgtcctgtctccatgcctggggtttgaatgatgttctcgatgacatttgc
cttgatcgccttgggatgcttaaaccacactgttctgtgtccttcggtcttctatctaga
ggaggccatatgtctctgatgcttcctagctataaccagtccatgggcaagccatcctat
gatggtgtagaattaacaaggaaaatgtctgttacagagggactgggaagggggacttat
ggagtatcacgtgcagtcaccacccagcacctcctgtctattatctctctggcaaatacc
ttgatgagtatgactaatgcaacttttattggagatcatatgaagaaaggaccaaccagg
cctccaaggccaggcactccagagctgtctaaagtgaagactcctccacccccagtttca
agtcctgcagctcaagggcaaattaaacaaggatggagtcaactagctgctatgcactgt
gtcatgctccctgatctattgggattggataaatttagacctcctcttcttgaaatgctt
gcacgcaggtggcaagatcgatgcttggaggtaagagaagctgcccaagccttgttgtta
gcagaactgagaagaattgaacaggcaggacggaaagaaacaattgatgcatgggctcca
tatttgccacaatatattgacagtgttatatcccctggagtgacagcagaagctattcag
actggtactgcaagtccagattcatccagcacagaagccaaagttcaagaagaagagcat
gatctggttgatgatgacatcacagcaggttgtctgtctagcctcccacaaattaaaaag
atatctacatcatatgaagagagacggaagcaagctactgctattgtcttgctaggagta
atcggagcagaatttggagctgaaatagaacctccaaagttactgaccagaccacgtagt
tccagtcagattcctgaagggtttggtttaaccagtggtggatcaaattattccttggca
aggcatacctgcaaggcattgacatttctgctgctgcagccacccagccccaaacttcct
ccacacagcaccatccgtagaactgcaattgatctgattgggcgaggttttactgtatgg
gagccatacatggacgtctctgctgtattaatgggccttttggagctctgcgctgatgct
gagaaacagcttgctaacatcacaatggggttgcctctgaatccagcagctgactccgcc
cgctctgcacgacatgctctctcgctcattgccactgccagaccacccgccttcataaca
actattgccaaggaggttcacagacacactgccttggcagcaaacactcagtctcaacaa
aatattcacaccacaacccttgctcgagctaaaggagagatcctgagagtcattgaaatt
cttattgaaaagatgccgacagatgtggtcgatctccttgtagaggttatggacatcatc
atgtattgccttgaaggatccttagtcaagaaaaagggacttcaggaatgctttccagcc
atatgcaggttctacatggtcagctattatgagcggagtcacagaatagcagtgggagct
cgccatggttcagtagccctctacgacatccggactggaaaatgtcaggtaaataaatca
ttgtga
DBGET
integrated database retrieval system
