Gavialis gangeticus (Gharial): 109298060
Help
Entry
109298060 CDS
T07453
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109298060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ggn03009
]
109298060
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
Pre-60S particles
RNases
109298060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
109298060
NCBI-ProteinID:
XP_019373739
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MQGLERTKKQKESVKTELKEEQKRFLQHNLQDEMSKNNVSLIPKDLKGNDFSSDKDDQCN
PSEVLKQHAVSSSEHSNHAYPLASSKYVLDHNCPATDLEYDPLLNYSAGLLSSSLAKEDE
NDKQQFQQVEASPCDNQQVFLETVFENKHCSPKKRARSSSPIKLEINLQESDDDDVLVID
VPPLTLTKKPKISRSYKKLEWEEKCAFVTLADNLQNREGAEECKSAEEKRTLGSGGLQKN
SKGLGNTEETLKMSSKTQSTNFLDVKIDVLKVSNNLQEHRNALTNSNENNIPLLFRTVVG
MQKETLNTSNAQTEMPVKTSNVEEHANYNFPSAPSMLQISWCSEDSLKDRSAVTQGTPKK
LSENTNEALCTWENGRDKLLDNISSHPSDKLNLFKETGPDTGVLIKNFNEGSDSCRIQAN
SKESEIIVLDSSSEEMDYSEEDSSVSESDDPTEECRRIFNEFVESEALKEKMANQAHGIN
SEAEALDCKTNTGFGQKKRIAHTAKFDVQTSKEIIVPFKAPPPQQANARILQVQHQAAQI
TAAVKSGQAFVAATSGQKKNVSGSSMTQSQSVGSVVSLNMLEVQPVTTSQLNVVLQGNAV
MGMPYRSSNLSVKRTAPMPMKVSTRRRPSVVPESGSKVSHDTRQRYVNFFVEEYMKICRT
VNEAFDKVCDLCLGQASGSRSTNANGSGKSEEKNDLTGIVLYRLLKDYILTDEQLNVNNF
PQPNPEKPGSAMLNGVTKTAASDPCKRTCCRCGKIYAVTSSGKHIRKEECNYHFGRVQRH
KVPGGMESRYSCCEGVVGSPGCQVAKLHVRDGRKENLEGFMKTFIKPPPPDGNHGVYALD
CEMCYTTQGLELTRVTVVDPNLQVAYNTFVKPDNDIIDYNTRFSGVTEEDLKNTTTTIRD
VQAILLNLFSAATILIGHSLESDLFAVKLFHNTVVDTSIVFPHRLGLPHKRALKNLTADY
LRRIIQDDVGGHDSREDAAACMELMLWKVKEDNKGRKW
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggactggaaagaactaaaaaacagaaagagtcagtgaagacagaacttaaagaa
gaacagaagagattcttgcaacataacttacaagatgaaatgtctaaaaacaatgtgtct
ttgattccaaaagatcttaagggtaacgatttttcctctgacaaagatgatcaatgtaac
ccttctgaagtacttaaacagcatgctgtttcatcatctgaacactccaatcatgcctat
cctcttgcatccagtaaatatgttcttgaccataattgtccagcaactgacctggaatat
gatccattgctaaactattctgcaggcttacttagctcttctttagcaaaagaggatgaa
aatgacaaacagcaatttcagcaggtggaagcatctccttgtgacaatcagcaggtgttt
ttggagactgtatttgaaaacaaacattgttctccaaagaagagagcaaggagctcttca
cctataaaacttgaaataaacctccaagaatctgatgatgatgatgttcttgtaattgat
gttcctccattgactctcactaagaagccaaaaataagtaggagctataaaaaattggaa
tgggaagaaaaatgtgcttttgtaacacttgcagataatctgcagaacagagagggagca
gaagaatgcaagtctgcagaggaaaaaagaacactgggcagtggaggtctacagaaaaat
agcaagggtttaggcaacactgaagaaacactgaaaatgtcatcaaaaactcaaagcaca
aacttcctggatgtgaaaattgatgtcttaaaggtttctaataacctccaagaacacaga
aatgctcttactaattctaatgaaaataacattcctttgctttttcgtactgtggtagga
atgcagaaagaaacattgaatacaagtaacgcacagactgaaatgccagtgaaaacatct
aatgttgaagaacatgctaattacaacttcccaagtgccccaagtatgctccagataagt
tggtgttctgaagatagtttaaaagatagatctgctgtaacccagggtactcctaagaaa
ttatcagaaaatacaaatgaagctctgtgtacctgggaaaatgggagagacaaactgctg
gacaacatatctagccatccatctgataaattaaatttgttcaaagaaactggtcctgat
acaggtgtcttaattaaaaactttaatgaaggaagtgatagttgtaggattcaagctaac
agcaaagaaagtgaaataattgtattagattcttcttctgaagagatggattatagtgaa
gaggattcatcagtctctgaatcagatgatcccacagaagaatgccggagaattttcaat
gagtttgttgaaagtgaagcactgaaggaaaagatggctaaccaggcccatggtataaat
tctgaagctgaggcattggattgcaagacaaatacaggttttgggcagaagaaaagaatt
gctcatactgcaaaatttgatgtacaaactagcaaagaaataattgtgccttttaaagca
cctcctccacagcaggccaatgccagaatcctgcaggtacagcaccaggcagcgcagata
acagctgctgttaagagtggccaagcttttgttgctgcaacttctgggcagaagaaaaat
gtatctggatcatcaatgactcagagtcaaagtgtcggatcagtggtttctttaaatatg
cttgaagttcagcctgttacaaccagtcaactaaatgtggttctacaaggaaatgctgta
atgggaatgccgtacagatcttctaatctttcagtaaaacggactgcacccatgcctatg
aaggtttctacacggaggaggccttctgtagttccagaatctggatccaaagtatcacat
gacacaaggcaacgatatgtcaacttctttgttgaagaatatatgaaaatttgtagaaca
gtgaatgaagcatttgacaaggtttgtgacttatgtttagggcaagctagtggcagcaga
tctaccaatgcaaatggatccggaaagtcagaagaaaagaacgatcttacaggaattgtt
ctctatagactactgaaagactacattctgactgacgaacaactaaatgtaaataacttt
ccgcaaccaaatcctgaaaagcctggcagtgctatgttgaatggagttacaaaaacagct
gcatctgacccttgcaaaagaacatgctgtagatgtggaaaaatatatgctgtaacttct
tcaggaaagcatattcgtaaagaagaatgcaactaccattttggtagagtacagagacat
aaagttcctggtggcatggaatcccgctacagttgttgtgaaggagtggtggggtctcct
ggatgccaagttgcaaagctccatgtccgtgatgggcgaaaagaaaacctagaaggcttt
atgaagacctttatcaaaccacctccacctgatgggaaccatggggtgtatgcactggac
tgtgagatgtgttacacaacacaaggcctggagcttactagagtgacagttgttgatccc
aacctacaggttgcctataatacatttgttaaacctgataatgacatcatagactacaac
acaagattttctggagtcacagaagaagatctgaagaacactacaacaactattcgggat
gtacaggccatcttgttaaacttgttcagtgcagctactattttaattggtcacagcttg
gaaagtgatttatttgctgttaagctattccataacactgttgtggacacatcaatagtg
tttcctcatcggctaggtttgcctcataaaagagcacttaaaaatctaacggctgattat
ctcagaagaattattcaagatgatgttggtggtcatgattctagggaagatgctgctgct
tgtatggaactaatgctttggaaagtaaaagaagataataagggtagaaagtggtga
DBGET
integrated database retrieval system