Gavialis gangeticus (Gharial): 109298132
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Entry
109298132 CDS
T07453
Symbol
HCN1
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109298132 (HCN1)
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
109298132 (HCN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Itfg2
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
109298132
NCBI-ProteinID:
XP_019373811
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MVGTKYWVQGWSDIIFQYFHLNLLIRMSWGTVSEALLMLRFYWDLIMLIMMVGNLVIIPV
GITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNEDSSEIILDPKIIKMNYLKSWF
VVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWE
EIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNGMVNDSWG
KQYSYALFKAMSHMLCIGYGARAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDS
SRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKIFDEENILSELNDPLREEIV
NFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGV
ITKSNKELKLTDGSYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRA
FETVAIDRLDRIGKKNSILLQKFQKDLNTGVFNNQENEILKQIVKHDRETVQAIAPVSLQ
QMSALNSSTTSSRIRTQSPPVYTATSLSHGNLHSPTPGTQTPQQAVILSPCSYTTAICSP
PVQSPLAGRTFQYVSPTASQLSLMQQQQQQQQQQQQQQQQKQQKTPTSSQKNEVHKSTQA
LHNTNLTREVRPLSASQPSLPHEISTLIARPHPTVGESLASIPQPVSSVQGSGMQAGNRG
TVPQRVALFRQMSSGAIPPNRGATAPSAVLKRDSSTVLSTDLEGDKPRFASNL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggttggaacaaagtactgggttcaaggctggtctgacatcatcttccagtactttcat
cttaacttactaataagaatgtcatgggggacagtgtcagaagccttgttaatgttgagg
ttttactgggacttaataatgcttataatgatggttggcaatcttgtcatcataccagtt
ggaatcacgttctttacagagcaaacaacaacaccatggattattttcaatgtggcatca
gacactgtttttctattggacttgatcatgaattttagaactgggactgtcaatgaagac
agctctgaaataatactggaccctaagatcattaagatgaattatttaaaaagttggttt
gtagttgacttcatttcatcaataccagtggattatatctttcttattgtagaaaaagga
atggattcagaggtttacaagacagctagagcacttcgtattgtgagatttacaaaaatt
ctcagcttgttacgtttattgcgactttcaagattaattagatacatccaccagtgggaa
gagattttccatatgacatatgatctggcaagtgctgtggtgagaatctttaacctgatt
ggaatgatgctgctactatgccactgggatggttgtcttcagttcttagtacctttactt
caggatttcccaccagattgctgggtgtccctaaatggtatggttaatgattcctgggga
aagcagtactcatacgcactcttcaaagctatgagtcatatgctttgcattggttacgga
gcccgggcccctgtcagcatgtctgatctttggattaccatgttgagtatgattgtgggg
gctacatgttatgccatgtttgttggtcatgccactgccctaattcagtctttggattcc
tctcgacggcaataccaagagaagtataaacaagtggagcagtacatgtcattccacaaa
ttacctgctgacatgcgccagaagatccatgattactatgagcaccgttaccaaggcaaa
atctttgatgaggaaaatattcttagtgagctcaatgatccccttcgagaggagatagtc
aacttcaactgtcgcaagcttgttgccacaatgcctctttttgccaatgcagacccaaat
tttgtgactgccatgctgagcaaactgcgttttgaggtgttccaacctggtgattacatt
atccgagaaggtgctgtgggtaaaaagatgtatttcattcagcatggggttgctggtgtc
atcaccaagtccaataaggaactgaagctgacagatggctcttattttggagagatttgc
cttttgactaagggccgccgaactgccagcgtacgagccgacacatactgccgtctgtat
tccctctctgtggacaatttcaatgaggttctggaggagtaccccatgatgagaagggcc
tttgaaacagtggccatcgacaggctagataggatagggaagaagaattcaattcttctg
caaaagttccagaaagacctcaatactggagttttcaacaatcaggagaatgagatcttg
aagcagatagtgaaacatgacagagagacagttcaggctattgccccagttagcctacag
caaatgtcagcactgaattctagcactacttcatcccgcatcaggacacagtcacctcct
gtttatactgcgaccagcctgtctcatggaaacctgcattctccaacaccaggcacacag
acacctcagcaagctgtcattctctctccttgctcctacactactgcaatctgtagtcca
ccagtacagagccctctggcaggtcgaacttttcagtatgtatcaccaactgcttcacag
ttgtcattaatgcagcagcaacagcagcagcaacaacagcagcagcagcagcagcagcag
aagcagcagaagacacctacttcatcacagaaaaatgaagttcacaagagtacacaagct
cttcacaacactaacctgacaagagaggtgagacctctctctgcctcacagccttctttg
ccccatgagatttctactcttatcgccagacctcatccaacagttggagagtcgctagcc
tccattccacaacctgtctcaagtgtccaagggtcaggtatgcaggctgggaacaggggc
actgtcccacagagagttgctctcttcagacaaatgtcttcaggagcaattcctcctaac
cgaggggccacggcaccatcagcagttctaaaaagggattcttccacagtcttaagcaca
gaccttgaaggagacaaaccacgatttgcttcaaacttatga
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