Gavialis gangeticus (Gharial): 109298297
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Entry
109298297 CDS
T07453
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109298297 (LRFN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109298297 (LRFN5)
04990 Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
109298297 (LRFN5)
Cell adhesion molecules [BR:
ggn04515
]
Immunoglobulin superfamily
SALM family
109298297 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
109298297 (LRFN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
Ig_VEGFR-1-like_5th
fn3
FN3_DSCAM-DSCAML_C
C2-set_3
Cys_Knot_tox
LRRCT
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
109298297
NCBI-ProteinID:
XP_019373871
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MEKLLLYLLFIGVAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVLALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDHIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPPLLSGRYFWSIPEEEFLCEPPLITRHTHELRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGSFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNTSSNNGDTKSSQDK
KVVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKTFLVNNLAAG
TVYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNNNGQHKVTNVNNVYSQTNGAQIQGCSGAMPHSMSKQVVGHEES
VQCCKVPNDSVTQSSDTCSSQDSTTTTSALPHTWTSSTSASQKQKRKPGPKPSNEPQSEA
VTNIESQNTNRNNSTALQLASRPPDAVKGAPMYKRAQSKPSKFLTLPAETSRAKRRYSLN
GELMEYHCYVNSQNTGGLWSKRSLSMNGMLIQSDKSDVDSGKATFSSSEWILESTV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttttgtatctgctgttcattggcgtagcagtgagagcccagatctgc
ccaaagcgctgtgtctgtcaaatcttgtctccgaatctcgcaaccctttgtgccaagaaa
gggcttttatttgtcccaccaaacatcgacagaaggactgtggagctgcggctggcagac
aattttgttacaaatatcaaaaggaaagattttgccaatatgaccagccttgtggacctg
acgctgtccaggaatacaataagttttattacaccccatgcgtttgctgatttgcgcaat
ttgcgggctttgcatttgaacagcaacagattgactaagatcaccaatgacatgtttagt
gggctttccaatctgcaccacttgatcctgaacaacaaccagctgactttgatttcttcc
acagcatttgatgatgttttggccctggaggaactggatttgtcctataacaacctggaa
accatcccttgggatgctgtggagaagatggttagcttgcacacgctcagtctggaccat
aatatgattgaccacattcctaaggggactttctcccatctccacaagatgaccaggtta
gatgtcacgtcgaacaaactgcagaagctgccacctgatcctctgtttcagagagctcag
gtattagcaacctcaggaattatcagcccctcgacttttgcgttgagctttggtgggaac
cctttgcattgcaactgtgagctcctgtggctgcggcgtctttccagagaagacgaccta
gagacgtgcgcctctcccccgctgctctccggccggtatttctggtcaatcccagaggag
gagttcctgtgcgagccccctctcatcaccaggcacacgcacgagctaagagtgcttgag
ggtcaaagggccaccctgcgatgcaaggcccggggagatccagagccagcaattcactgg
atttcaccggagggcaaactgatttcaaatgcaacaaggtcgctggtgtatgacaacggc
acgcttgacatattgataaccacggtcaaggatacaggttccttcacctgcatagcttcc
aacccggcaggagaagccacgcaaacggtggatctgcacatcatcaaactcccgcatttg
ctaaacagtacaaaccacattcacgagcccgaccccggctcctcggacatctcgacttcc
accaagtcgggctccaacacgagcagtaataacggggatactaaaagcagccaggacaag
aaagtggtggtggcggaagctacatcgtccactgccctgctgaaatttaattttcaaaga
aatatacctggaatacgtatgttccagatccagtacaatggcacttatgatgactcactt
gtttacagaatgatacctcccacgagcaaaaccttcctggtcaacaacctggccgctggg
actgtctacgacctgtgcgtcttggcaatctacgacgacggcatcacctccctcactgcc
accagggtcgtcgggtgcatacagttcaccacggagcaggattatgtgcggtgccacttc
atgcagtcccagttcctgggaggcaccatgatcatcattatcggtgggattatcgtggcc
tcggtgctggttttcatcatcatcctaatgatccgttataaagtgtgtaataacaacggg
cagcacaaggtgaccaacgtcaacaatgtgtattcccagaccaacggggctcagattcaa
ggctgcagcggggctatgccccattccatgtccaaacaggtcgtcgggcacgaggagagc
gtccagtgctgcaaagtcccaaacgacagcgtgactcagtcgtcagacacgtgctcgagc
caggactccactaccactacctctgctttgcctcacacgtggacttccagcacttctgcc
tcccaaaagcagaagagaaagccagggccaaagccaagcaatgagccacagagcgaagct
gtcacgaatatcgagtcccagaacactaacagaaataactccactgcactgcagttagct
agccgtccccccgacgccgtcaaaggggcccccatgtacaaaagagcacaatcaaagcca
agtaagtttctcactttgccagctgaaacatcccgagcaaagcgcaggtactctctgaat
ggagaattaatggaataccattgttatgttaactcccagaacacaggtggattatggtct
aaaaggagcttgtctatgaatgggatgctaattcagtcagacaagtctgacgtggatagt
ggaaaagcaactttctcgagttctgagtggatattggaaagcactgtgtga
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