Gavialis gangeticus (Gharial): 109298391
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Entry
109298391 CDS
T07453
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109298391 (BRF1)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
109298391 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
109298391
NCBI-ProteinID:
XP_019374013
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MPGGRVCAACGSADIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVETGGGGASAVGQFVS
LDGPGKTPLIGGGFHANLGKESRAQTLQNGKRQIHHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEGECDPPSFTAGQR
KLKMQQLEKELSKKLEDYEGEISIYQDEIEIELENSRPKAKGVFANYTKDDSIEDNTSSV
FGEEEVEDEELEAAANHLNKDFCNEILDKDRLKTKEDGECRNGNAPPVRPPALESLLGPL
PTAASLGITESIKDCISTKEREPNENTGDGELDLSGIDDSEIDRYILNETEAQIKAELWM
KENADYLKEQKEKEARIAKEKELGIYKEQKPKKSAKKREPIQASTAGEAIEKMLEQKKIS
SKINYNVLRDLNSKGSSTPKKEDDSTDDSSNTKKLSRRKSIASRNLANSVNTVGKRLRPL
ISSQLAKKAATEEVTFSDLQPEVQELGKTESVLVESGPVSYNHEDDAEEEEVEEEDDHCM
SALQLMGGNDYGCDMDDDDGY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgggcgggtgtgcgcggcgtgcggcagcgccgacattgaggtggacgcggcg
cggggcgacgccgtgtgcaccggctgcggctccgtgctcgaggacaacatcatcgtctcc
gaggtccagttcgtggagaccggcggtggcggcgcctcggccgtggggcagttcgtgtcc
ctcgacggtccgggtaaaacaccgttgataggaggaggatttcatgccaatttgggaaag
gaatcgcgagcacaaactctacagaacgggaaacgtcagattcaccatttgggaaaccag
ctgcaactcaaccagcactgtcttgatactgcctttaattttttcaagatggcagtgagc
aagcacctcacccgtggaagaaagatgactcacgtaattgctgcatgtctctacttggtg
tgtagaacagaaggaactcctcacatgttacttgacctcagtgacctccttcaggtgaat
gtctatgtgctgggaaaaacttttcttctgttggccagagagctctgcataaatgctcca
gctatagatccttgtttatatattcctcgttttgcacacatgctagaatttggagataag
aaccatgaggtatcaatgacggcgctgaggttattacagaggatgaagagagactggatg
cacacaggacgtcgaccatcagggttgtgtggagcagctcttctggtggcagcaagaatg
catgatttccgacgtactgttaaggaggtcatcagagtggtcaaggtttgtgagtctacg
ttacggaaaaggcttacggaatttgaagataccccaacaagtcagctcacgatagatgaa
tttatgaagattgatttggaaggggaatgtgatcctccttcgtttacagctggtcaaaga
aaactaaagatgcagcagctcgagaaggagctgtcaaaaaagcttgaagattatgaaggt
gaaatatcaatttaccaagacgaaatagagattgaattggaaaatagtaggccaaaggca
aaaggagtatttgcaaattatactaaagatgattctatagaagataatacttctagcgta
tttggagaggaggaggtagaagatgaagaactggaagcagctgctaatcatttaaacaag
gacttttgtaatgaaattcttgacaaagacagattaaagacaaaggaagatggagaatgc
agaaatgggaacgcacctcctgtaagaccacctgcactggaatccttgctcggcccactc
cctactgcagctagccttggaataacagagtccataaaagactgtatatccacaaaggag
cgagagcccaatgaaaatacaggagatggtgaattagatttgagtggaattgacgacagt
gaaatagacaggtatatacttaatgaaacagaagctcagataaaagctgaactgtggatg
aaagaaaacgcagattatttgaaggaacaaaaagaaaaagaagcaaggatagcaaaagag
aaggagcttgggatttataaggaacaaaagccaaagaaatctgcaaaaaaacgggagcca
attcaagccagcacagcaggagaggcaattgaaaagatgttagaacagaagaaaatttca
agtaaaattaattataatgtgctaagggacctgaacagcaaaggaagtagcacaccaaag
aaagaggatgacagcactgatgacagcagcaacaccaagaagctgtcaagaagaaaatct
attgccagtaggaatttagccaactctgtaaacactgtgggaaaaagattaagacccttg
atttcttcacagctagctaagaaggctgcaactgaagaggttaccttttcagacttacaa
ccagaagtgcaggagttgggaaaaacagagagtgtgctggtagagagtggaccagtgtcc
tataaccatgaggatgatgctgaagaagaagaagtagaagaggaggatgatcattgcatg
agtgcccttcagttaatgggaggaaatgattatggctgtgatatggatgatgatgatggc
tactag
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