Gavialis gangeticus (Gharial): 109298473
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Entry
109298473 CDS
T07453
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109298473 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109298473 (PAPOLA)
Enzymes [BR:
ggn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109298473 (PAPOLA)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
109298473 (PAPOLA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
RMD6
DUF4269
Motif
Other DBs
NCBI-GeneID:
109298473
NCBI-ProteinID:
XP_019374144
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPFPLTTQGSQQTQQLQKHYGITSPISLAAPKDSDCILTQKLIETLNPYGVFEEEEELQR
RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMD
MKIAAMHVKRRQLHQLLPNHVLQKKKKHSTEGVRLTTLNDSSLDLSMDSDNSTSVPSPTS
AMKTSPLNSSGSSQGRSSPAPAVTATSVTNSQASEVTVPQTNSSESSGGTSGESIPQTAT
QPAISPPPKPPISRVLSSTRLVNQTPRTAGNTATKIPSPVVGVKRTSSPHKEESPKKLKT
EEDEINEDVSCLDAGDHDKMEIKEQLETETNITSQTETVQTTASLQAPQVIPCKIVGNAI
FRSDRGNCHFSRFTQKSQNGDLKNVQYRPFRYPCSPCKSYSCYQEFNKTEIESVKKKQPQ
GSINNICQLNLLSSNA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttccactcacaacccagggatcacaacaaactcagcagctacagaagcattat
ggcattacctcacctatcagtttggctgcccccaaggactctgactgtatacttacccag
aaattaattgaaacgctaaacccctatggtgtatttgaggaggaagaggaactgcagcgc
aggattctaattttggggaaattaaacaacctggtaaaggaatggatacgtgaaatcagt
gaaagcaagaatcttccacagtctgtaatagaaaatgttggaggaaaaatatttacattt
ggatcctacagattaggggtgcatacaaaaggtgctgatatagatgcattgtgtgttgca
ccaagacatgtggaaagaagtgactttttcacctcattttatgaaaaattgaagcaacaa
gaagaagtgaaagatttgcgggctgttgaagaagcatttgtccctgttatcaaactgtgc
tttgatggaattgagattgatattttgttcgcgagattagcgctgcaaactattcccgaa
gatctagaccttcgagatgatagtctacttaaaaatttagacattagatgcatacgaagt
cttaacggttgcagggtgaccgatgaaattctgcatctagtaccaaacattgacaacttc
aggttaacactgagagctatcaaactgtgggcaaaacgccacaacatctattccaatata
ttaggtttccttggtggtgtttcctgggctatgctagtagcaagaacttgccagctttat
ccaaatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaa
tggccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgg
gatccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcatac
ccacagcagaactctacctacaatgtgtccgtttctacacggatggtcatggttgaggag
tttaaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaa
ctttttgaagctccaaacttctttcaaaagtacaagcattatattgtacttctagcaagt
gcaccaacagaaaagcagcgactagaatgggtgggcttggtggaatcaaaaattcgtatt
ctagttggaagcttggagaaaaacgaattcattacactggctcatgtgaatcctcagtca
ttcccagcacccaaggagaatcctgacaaggaagaatttcgtacaatgtgggtgattggg
ttagtgtttaagaaaactgaaaattctgaaaatctaagtgttgatcttacatatgatatc
cagtcttttacagacacagtttataggcaagcaataaacagcaagatgtttgagatggat
atgaaaattgctgcaatgcatgtaaaacgaaggcaacttcaccaactgctacctaatcat
gtgcttcagaaaaagaaaaagcattcaacggaaggggtcagattgacaacgttgaatgac
agcagcctagacttatctatggacagtgataacagcacgtctgtgccttctcctactagt
gctatgaagacaagcccgttgaacagttctggaagttctcagggcagaagcagtcctgct
ccagctgtaacagcaacatctgtgaccaactcacaggcttctgaagtcactgtgccacaa
acaaattccagtgaaagctcagggggtacttcaggtgaaagcattcctcaaactgccaca
cagccagccatttctccaccaccaaagcctcccatctctagagttctttcttcaacacgt
ctggtaaatcagacaccaagaactgcaggaaatacagcaacaaaaataccaagccctgtt
gttggggtgaagagaacatcatctcctcataaagaagagtctcctaaaaaattaaaaaca
gaagaggatgaaataaacgaagatgtgagttgccttgatgcaggtgatcatgataaaatg
gaaattaaggaacaacttgaaacagaaactaatattacttcccaaacagaaactgtgcag
acaacagcatctctgcaagctcctcaggtgattccatgcaaaatcgtgggaaacgccatt
tttcgcagtgatcgtggaaactgccatttttcacgctttacgcagaaatcgcaaaacggt
gatttaaaaaacgtccagtacagacctttcagatatccctgctctccctgcaaatcctat
tcctgttatcaagaattcaataaaactgagattgaatcggtaaagaaaaaacaacctcag
gggtccataaacaatatctgccaactcaacctgttgtcttctaatgcttaa
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