KEGG   Gavialis gangeticus (Gharial): 109298535
Entry
109298535         CDS       T07453                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109298535 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ggn03400]
    109298535 (TDP1)
DNA repair and recombination proteins [BR:ggn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     109298535 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 109298535
NCBI-ProteinID: XP_019374212
LinkDB
Position
Unknown
AA seq 608 aa
MLQESEHGKWTISSSDESTEENSDHEKPSTSALLPNGHGKNSGPQYPCSEARKVAHRRKD
SLAKFTEGSFLTEVSPAKKRRTSQVGLGWCLSSSDEEPESQLKDVKKEMVKEEKYDMPED
QLSCLCKDNDSCSMSPKSEEHHEPSGEVKGIWDLLNGGNPFRFFLTKVKGIKSKYNSGAL
HIKDILSPLFGTLVSSAQFNYCIDVGWLIRQYPQEFRKKPLLIIHGEKRESKAELIAQAR
PYENVSLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIADDWYQKTQGIWLSPLYP
RLPSGTPGSSGESVTNFKSDLINYLVSYNSPSLKEWVDIIQEHDLSETKVYLIGSTPGRY
QGSQKEKWGHFRLRKLLKDHASPVPAQESWPVIGQFSSIGSMGADQSKWLCSEFQESLVA
LGNRTKTLARQDIPVHLVYPTVDNVRQSLEGYPAGGSLPYSMQTAQKQLWLHSYFHKWSA
EVSGRSHAMPHIKTYMRASTDCQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVL
FLPSAFGLDTDYFHVKENFFSENKKSLASFPVPYDLPLEQYGSKDHPWIWNIPYTKAPDT
HGNMWVPS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgcttcaagaaagtgaacatgggaaatggacgatatctagcagtgacgaaagcacagaa
gaaaactctgaccacgagaagccatctacatctgcattattaccaaatgggcatggcaaa
aatagtggaccacagtacccatgttcagaagccagaaaagttgctcacaggagaaaagat
tctcttgcaaaatttactgagggaagttttcttactgaggtatctccagcaaaaaaaagg
agaacttcccaagtaggcttaggctggtgtctttcaagtagtgatgaagaacctgaaagt
cagctgaaggatgtgaaaaaagaaatggtcaaagaggagaaatatgacatgcctgaagac
caactttcatgcctatgtaaagataacgactcatgctcaatgagtcccaagtcagaagag
catcatgagccatcaggtgaagtcaagggcatttgggatttgttgaatggaggaaatcct
ttcagattcttcctcactaaagttaaaggcattaaatctaagtacaactctggagcactt
catataaaagatattttgtcacctctctttggaactcttgtgtcttctgctcagtttaac
tattgcatagatgtgggatggctcataagacagtatccacaggagttcaggaaaaagcct
ttattaataatccacggtgagaagagagaatccaaggctgaactgattgcacaggcacgc
ccatatgaaaatgttagcctttgccaggctaagctggatattgcctttggaacccaccac
acgaaaatgatgttgttgttatatgaagaaggtcttcgagttgtgatacacacatccaac
ctcattgctgatgactggtaccagaaaactcagggaatatggttaagtcctctatatcca
aggctaccttcaggaactcctggttcttccggtgaatctgtaaccaattttaagtctgac
ttaataaactacttggtatcttacaattctccatctctcaaagagtgggtggatataatc
caggaacacgatctttcagagacaaaagtatatctgattggatcaaccccaggaagatac
caaggctctcaaaaagaaaaatggggccactttaggcttagaaagcttttgaaagatcat
gcatcaccagtgccagcccaagaatcttggcctgtaataggacagttttcaagtattgga
tctatgggagctgaccagtccaaatggctgtgttcggaatttcaggagagcctagttgct
ttaggcaacagaacgaagactctagcgagacaagacattccagtccatttggtttatcct
actgtggacaatgtgaggcaaagtttggaaggataccccgctggtggctcacttccctac
agtatgcaaacagcacagaaacaactttggctgcattcctatttccacaaatggtcagca
gaggtctcaggccgaagccatgccatgcctcacattaagacttatatgagggcatctact
gactgccagaagattgcatggtttttagttaccagtgccaatctttctaaagctgcttgg
ggagctttggagaaaaatggtacccagctgatgatccgttcctatgagcttggagttctt
ttcctgccttcagcatttgggttggatacagattacttccatgtgaaggagaattttttt
tcagaaaataaaaagtcattggcatcttttcctgtgccttatgatttgcctctggaacag
tatggaagcaaagaccacccatggatttggaatatcccctacaccaaagctccggatact
catggaaacatgtgggttccatcgtga

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