Gavialis gangeticus (Gharial): 109298759
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Entry
109298759 CDS
T07453
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04140
Autophagy - animal
ggn04142
Lysosome biogenesis
ggn04145
Phagocytosis
ggn04148
Efferocytosis
ggn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109298759 (VPS18)
04142 Lysosome biogenesis
109298759 (VPS18)
04140 Autophagy - animal
109298759 (VPS18)
04148 Efferocytosis
109298759 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109298759 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109298759 (VPS18)
Membrane trafficking [BR:
ggn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109298759 (VPS18)
Hops complex
109298759 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-RING_16
aq_1631
STX17_N
zf_RING_Vps8
zf-ANAPC11
DUF2229
Nup54_57_C
DUF5600
TMEM249
zf-C3HC4
zf-rbx1
DUF1664
RBSN_mid
KNOX2
Lact-deh-memb
Motif
Other DBs
NCBI-GeneID:
109298759
NCBI-ProteinID:
XP_019374571
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLSRAASLPPGRASVGIPHSGYVNARLEKETPIFNKQRIDFTPPEKINSL
VVSCNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEARVYKMFLDHTGSHLLIALNTSE
CLYLNRNAQKVRTLSRWKGHLIESVGWNKFLGTETNTGPILVGTAHGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEETGPVPVCCLEIERGIDGKYFIIATTHKRLFQFVGKVAEGTE
QQGFSSIFAIHPDHLPSFREFPASFGYSEIAFYTPKLRSSPRCFAWMMGNGVLYGLLDYG
RPDSILSEERVWVYPSDIDVTINKPISIVLTQFHFLLLLPDRVTAVCTLNGQVVFQDVFL
EKFGSLKHMIKDPTVGQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKKYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLLKKLASL
KHSEKTQTTLLTTWLTELYLNWLGVLEGDASKRHLYLETRERFRTFLISPKNKECLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVIAHHCQHEEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGIKLDAKKLIPALVNYSQSGSTQQINEAIRYMEFCVYELEETE
QAIHNYLLSLYALCRPDSLLSYLEQTGTSPSRIHYDLKYALRLCAEHEHHRACVHIYKVM
EMYEEAVDLALQVDVDLAKSCADLPEEDEELRKKLWLKIACHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCSVCDFPLLNRPFYLFLCGHMFHYDCLLQAVYPNLPAYKQAKLEDLQK
KLAATSQPSKAHHRPKDTDATSLGKGQQSREQIKADIDDIVAAECVFCGELMIRSIDKPF
IDPQKYEEEKQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgaatacgaggactcgttgtcccgcgccgccagcctgccgccc
ggccgcgccagcgtcggcatcccgcactcaggatatgtgaatgcccggttggagaaggaa
accccgatatttaacaagcagagaatagatttcactcctccagagaaaattaacagtcta
gtggtctcctgtaaccagctctgcatgagtcttggcaaagacacacttctaaggattgat
cttggcaagccagatgaacctaatcaggtagagttgggacgcaaggatgaagccagagtc
tacaagatgtttttggaccacacaggttctcacctcttgattgcattgaacaccagtgaa
tgcctctatttgaacagaaatgctcagaaggtgcggacactgtcccgctggaagggtcat
ttgatcgaaagcgtgggctggaacaagttcctgggtacagaaactaacactggccctatc
ctggtggggacagcccatggccaaatatatgaggctgagatctctgtcagtgaggggagc
ctcttcagcactaaccctgaccagtatttccgccaggtttatacattggaggaggagact
gggcctgttcctgtctgctgtttggagatagaacgtgggattgatgggaagtattttatc
attgccaccactcacaagaggctcttccagtttgttggcaaggtagctgaagggacggaa
cagcaaggcttcagctccatatttgccatacatccagaccacttgccaagcttccgggag
ttcccagccagctttggctatagtgaaatagcattttacaccccaaagctacgctcctct
ccccgctgctttgcctggatgatgggaaatggtgtcttgtatggtttgttggactatggg
cggcctgactctattctgagtgaagaacgggtctgggtatatccttctgacatagatgtg
acaattaataagccaatctccattgtgctcacccagttccatttcctgctgcttctgcct
gacagagtgacagcagtgtgcacactaaatgggcaggtagtcttccaggatgtgttcttg
gaaaaatttggctcactgaagcacatgatcaaagatccaacagttgggcagatctggatc
cacacagagaaagttgtgtttcgctatcatgtacaacgggagtctagagatgtgtggaag
atgtacatgaacatgaacaaatttgatttggccaaagagtattgcaaagaccggcctgag
tgcctggatattgtgttggcaaaagaggcagaacactgtttccagaacaagaagtacctg
gatagcgccaagtgttatgcccttacacagaactactttgaggaaattgcccttaagttc
atcgaagccaaacaagaagaggcattgatggagttcctgctcaagaaactggcgagcttg
aagcactctgagaagacccagacaactctgttgaccacttggctaacagagctgtacctg
aattggctgggtgtgctggagggtgatgcctcaaaaaggcacctctatttggagacccgt
gagaggtttcgtaccttcctaatcagccccaaaaacaaagaatgtctatttaataaccgt
gcatctatttatgagttgctggcaagtcatggggatacggaacacatggtctactttgct
gttattatgcaggattatgagcgagtgatagcccatcactgccagcatgaagagtatgat
gaagccctaaacgtactgtccagacatagagatgaaaagctgttttacaagttctctcca
gttctgatccagcacatccccaagaaggttgttgatgcttggatatccatgggtataaaa
ctagatgcaaagaagcttatacctgctcttgtcaattatagtcagagtgggagcacacaa
cagatcaatgaagctattcggtatatggagttttgtgtgtatgaattggaggaaactgag
caagctattcacaactacttattgtctctttatgctctgtgtcggccagactccctgctg
tcatatctagaacaaactgggaccagtcccagtaggatccactatgatctgaagtatgcg
cttcggctctgtgcagagcatgagcaccaccgagcttgtgtccatatatacaaagtgatg
gaaatgtatgaggaggcagtggatctggctttgcaggtggatgtggatctggccaagtcc
tgtgcagaccttcctgaagaggatgaggagctccggaaaaagctgtggctgaaaattgca
tgccatgtagttcaagaagagaaggatgtgaagaaagccatggcctgcctctccagctgc
aacctgctgaaaatcgaagatgtcctgccattcttcccagactttgtcaccattgatcat
ttcaaggaggctatctgcaactctctggaggactacaacaagcatattgaggagctgaag
agagagatggaggaagccacacagagtgccaaaaggatccgggaggatatccaggaaatg
agaaacaaatatggctctgtagagcctcaggagaagtgttctgtctgtgactttcccctc
ctaaatcgcccattctaccttttcctttgtggccacatgtttcactatgactgccttctt
caggcggtttatccaaacctgcctgcctacaaacaagctaagttagaagaccttcagaag
aaactggcagccacaagccagccctccaaagctcaccatcgcccaaaggacacagatgcc
actagtttagggaaggggcagcagagtcgggaacagatcaaggctgacattgatgatatt
gtggcagctgaatgcgtgttctgtggggagctgatgatccggtctattgacaagcctttt
attgatccacaaaagtatgaagaggagaagcaaagttggctgtag
DBGET
integrated database retrieval system
