Gavialis gangeticus (Gharial): 109298792 Help Entry 109298792         CDS       T07453                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism ggn  Gavialis gangeticus (Gharial) Pathway ggn04140   Autophagy - animal ggn04142   Lysosome biogenesis ggn04148   Efferocytosis ggn05132   Salmonella infection Brite KEGG Orthology (KO) [BR:ggn00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     109298792 (VPS39)    04140 Autophagy - animal     109298792 (VPS39)    04148 Efferocytosis     109298792 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     109298792 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ggn04131]     109298792 (VPS39) Membrane trafficking [BR:ggn04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     109298792 (VPS39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin VPS18_solenoid_2nd LIF1_N DUF4145 EcoR124_C Motif Other DBs NCBI-GeneID:  109298792 NCBI-ProteinID:  XP_019374614 LinkDB All DBs Position Unknown AA seq 835 aa AA seqDB search MSSESGCCNRFEVTLEKSNKNFSKRIQQIHVVSQFKILISLLENNIYVHDLLTFQQITAV SKAKGASLFTCDLQHSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMA WCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADRKVAVGQDDLTVVLNE EGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGG TNIVYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNL YAFNLFCQKRFDDSMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEK AHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHT NVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANS PLKGHERTVQYLQHLGSENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLNF LIENFKNLAIPYLEHIVYVWEETGSDFHNCLIQLYCERVQGLMKKYLSTFPPDKTPLPAG EEEGELGEYRGKLLAFLEISSCYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVH ILKDTKMAENYCHKHYDRNKDGSKDVYLSLLRMYLSPPSVHCVGPIKMELPKPETNLPAA LQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLR VQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNAVDT NT seq 2508 nt NT seq  +upstreamnt  +downstreamnt atgtcatcagaaagtggctgttgcaacaggtttgaagtgacactagagaagtccaacaag aacttctcaaaaagaattcaacagattcatgttgtttcccaatttaaaattctcatcagt ttgttagaaaataacatttatgtccatgacctgttgacgtttcaacaaatcactgcagtc tctaaggcaaaaggtgcatccctcttcacttgtgacctacagcactctgatacaggggag gaggtgctgagaatgtgtgtagcagtacgaaagaaactacagctttatttctggaaggac agggaattccatgaattacagggggacttcagcgtaccagacgtgcccaagtctatggca tggtgtgaaaactctatttgtgtgggcttcaagagagattattatctgataagggtggat ggaaaaggatctatcaaagaactgttcccaacagggaagcagcttgagccactggttgcc cctttagcagacagaaaagttgcagttggccaagatgatctaacagtagttcttaatgaa gaaggggtctgtacccagaaatgtgccttgaattggacagatattcccatagctatggaa catcagcctccgtacatcattgctgtgctgccaagatatgtagagatccgtacctttgaa ccacggctgctggtgcagagtatcgaactgcagagaccacgcttcatcacatctggaggt acgaatattgtatacgtggccagcaatcactttgtttggcgtcttattccagtctctatt gcaacccagatacaacagcttttacaagacaagcaatttgaactggctctacaattggca gaaatgaaggatgattcagatagtgagaagcggcaacaaattcatcacattaagaacctg tatgctttcaacctcttctgccagaagcgttttgatgattccatgcaagtttttgccaag ctcggtacagatcctacacatgtaatgggtttgtatcctgatctgctgcctactgattat agaaagcagttgcagtatcccaaccctttgccagtgctctctggggctgagcttgagaag gcacacttagcactcatagactacctaacacagaaaagaagtcagctggtaaagaagctg aatgactcggaccaccaatctagcacctcacccctcatggagggaacacccacaatcaaa tccaaaaagaagctgctgcagataattgacaccactctgctgaagtgttacctgcataca aatgtagcccttgtggcaccattgctacgtttggagaacaatcactgccacattgaagag agtgaacatgtgttgaagaaggcgcataaatacagtgaactgataatactatatgagaag aaggggttgcatgaaaaagctttgcaggtattagtggatcagtcaaagaaagccaattcg ccattgaagggtcatgagaggacggtgcaatatctacagcatttgggctcagagaacttg cacttggtattctcctattctgtctgggtgctcagagactttcctgaagatgggctgaag atatttacagaagacctccctgaagtggaagccttgccacgggacaaagtgctcaacttc ttgatagaaaacttcaaaaatctggctattccttacctggaacacatcgtctatgtctgg gaggagactggctcagatttccacaactgcctgatccagctgtactgtgagagagtgcag gggttaatgaagaaatatctcagcaccttccctccagataaaactccactgcctgctgga gaagaggaaggagaactgggggaataccggggaaagctccttgcctttcttgagatttct agttgctacgaacctagccgtcttatcagtgacttcccttttgatgggctcctggaagag cgtgccctattgttgggtcgtatggggaagcatgaacaagccctcttcatttatgtccac attctgaaggataccaaaatggctgaaaattactgccacaaacattatgacagaaacaaa gatggtagcaaagatgtgtatctgtctctgctccgaatgtatctgtcaccacctagtgtt cattgtgtggggccgatcaagatggaactgccaaagcctgaaaccaatctcccagctgcc ttgcaggttctagaattgcaccacagcaaattggataccactaaggcaataaatctgctc ccggcaaatacacaaattagcgagattagaatcttcctagaaaaggtccttgaggaaaat gcccagaagaagcgattcaatcaagtactcaagaatcttctccatgcagaattccttagg gttcaggaggagcggatcttgcatcagcaggtaaaatgtatcatcacggaggagaaggtg tgcactgtgtgtaagaagaaaatagggaatagtgcgtttgccagatatcctaatgcaata gttgtacattatttctgctccaaagaagtcaatgcagtggacacctga

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