Gavialis gangeticus (Gharial): 109298850
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Entry
109298850 CDS
T07453
Symbol
DCAF5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109298850 (DCAF5)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109298850 (DCAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_Vps41
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
109298850
NCBI-ProteinID:
XP_019374712
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MRRRRGAGESMRSVVGFLSQRGLAGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIE
FSNNGGQWLVSGGDDRRVLLWQMEEAIHSRVKPVQLKGEHHSNIFCLAFNSGNTKVFSGG
NDEQVILHDVESTETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEP
FCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVR
FNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSD
DFNLYMWRIPPDPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIW
SPYKQPDCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFFD
SLVRREIEGWSSDSDSDLSESTILQLHAGVSERSAYSESESSASLHHTPPHMAEESDETA
YNLGALRSTESPSAREDVASRQQRLSALRRYQDKRLLALSNESDSDENTCEAELDTDLFP
RPRSPSPEENESSSSSSSSSSEGEEELKERRTLMRQRNAMRRRQKIQKEERTNTNTENVN
TYIGEDIYDYPQIKVDDLSSSPTSSPERSSIKKEVPKERASPCSDSESVERKIYRAYRWL
HYSYISYSAGKDGESSHGDGENDEGKPGTSGRNSAPPTLNKEEASNLSSLVPQGSQGLSE
SQSKETLKECGLVENSSNGQGHEFDNQWRMETQESTSQDTSSGSVEYSFETKKLNGKAIC
KGLNSLAEEPCNQTAGLVEQKNSQNCQPASSHHSLVTSKDLFSIATVCSGSGNCSRNQTD
DSEERNLETCVNHNNGHLHPRPSCFNNGQSFGEQEIVTQGLQLYSNADKVTLAQADVTFH
KECCLSEMGSNNHGVSTKEDIADLHLTDSENSQALGGLKRHRAEFEDTDSENSSSEKKLK
T
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcggcggggcgcgggggagagcatgcggtccgtggtgggcttcttgtcccag
cggggcctggcgggcgaccccctgctcacgcaggacttccagcggcggcgcctgcggggc
tgcaggaacctctacaagaaggacctgctgggacacttcggctgcgtcaacgccatcgag
ttctccaacaatggaggccagtggctggtctcaggaggggatgaccgccgggtactgctt
tggcaaatggaagaagccatccactccagagtcaaaccagttcagctgaaaggggagcat
cattctaacatcttttgcctggctttcaacagtggcaacacaaaagtattctctggaggc
aatgatgagcaagttatactccatgatgttgaaagcactgagaccttggatgtgtttgcc
catgaagatgcagtgtatggcctttcagtgagtccagtgaatgataacatctttgccagc
tcatctgacgatggccgggttctcatttgggacatcagagagtctccccatggagagcca
ttctgcttggcaaactacccttcagcttttcatagtgtgatgtttaacccagtagaaccc
agattattggctactgctaactccaaagagggcgtgggactttgggatattcgcaaacct
cagagttcattgctccgttatggtggaaatctgtcccttcagagtgccatgagtgtccgc
ttcaacagcaatggaacccagctgctggcattgcgtcggcgccttccaccagtcctctat
gacatccactctcgcctgcctgtttttcagtttgacaaccagggttacttcaactcgtgc
acgatgaagagttgttgttttgcgggcgaccgtgaccagtacatcctctcgggctcagat
gacttcaacttgtatatgtggcgaattcctccagatccagaagcaggtggaatcggcagg
gttgttaatggtgcctttatggttttgaaaggtcatcggtcaattgtaaaccaagtccga
tttaatcctcacacctatatgatctgttcctctggagttgaaaagattataaagatctgg
agtccttataaacagcctgactgcactggagatctggatggcagaattgaggatgattca
cggtgcctctacactcacgaagagtacattagtcttgtgttgaacagtggcagtggcttg
tctcatgattatgccaaccagtcagtccaggaagatccacggatgatggctttctttgat
tcactggtacgccgggagattgagggctggagttctgactcggatagcgacctcagcgaa
agcaccatcttgcagctccatgctggagtaagtgaacgctctgcttatagtgaatcagaa
tcttctgcttcactacatcacaccccaccacatatggcagaagaatcggatgaaacggcc
tataacttaggagccttaagatcaacagaatctccatcggccagagaagatgtggcttct
cgtcagcagaggctgtctgcacttagaaggtatcaggacaaacgtctcctggccctttcc
aatgaatctgattctgatgaaaatacctgtgaggcagaactggacacagacctttttcca
cggccaaggtctccaagtcctgaagagaatgaatctagcagttccagcagcagtagcagt
tcagagggtgaagaggaattgaaagaacggcgtacattgatgcgtcaacgtaatgcaatg
agacgccgacagaaaatacaaaaggaagagaggactaacacaaatacagaaaatgtgaac
acctacataggtgaggatatctatgattacccacagatcaaagtggatgacctttcctct
tctccaacctcctcacctgaaaggagttccattaaaaaggaagttcccaaagaaagggcc
tctccttgttcagacagtgaatctgtagaaagaaagatttacagagcttacagatggctt
cattattcttatatatcctattcagctggtaaagatggtgaatcttcccatggagatggg
gagaatgatgaaggaaagccaggaactagtggaagaaacagtgcaccacctacactaaat
aaagaagaggctagtaatttgagttcactggttcctcaaggttcccaaggtctctctgag
agccaaagcaaagaaactttaaaagaatgtggtttggtagaaaattctagtaatggtcaa
ggtcatgaattcgacaatcagtggcgaatggaaactcaagaaagcacgtcccaagacacc
agcagtgggtctgtagaatattcttttgagactaaaaagcttaatggaaaagccatctgc
aaagggctaaatagtcttgctgaagagccatgcaaccaaactgcaggacttgtggaacag
aaaaacagccagaactgtcaaccagcatcaagccatcactcactggtcacttccaaggat
ttgttttccattgccaccgtctgtagtggatctggtaattgctccagaaaccagactgat
gacagtgaggaaagaaatcttgagacctgtgtaaaccacaataatggccacctacatcct
cgcccttcatgcttcaacaatggacagagctttggagagcaggagatagtgacccaagga
ctacaattgtactcaaatgctgataaggtcacccttgcacaggcagatgtgacttttcac
aaagagtgttgcttgtctgaaatgggctccaacaatcacggtgtgagcacgaaagaggat
atcgctgacttgcatctgacagatagtgagaactctcaagctttaggaggactgaaaagg
cacagagcggagtttgaagacacggattcagagaattcttcctcagaaaagaagctaaaa
acatga
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