Gavialis gangeticus (Gharial): 109298904
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Entry
109298904 CDS
T07453
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04136
Autophagy - other
ggn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109298904 (ATG13)
04136 Autophagy - other
109298904 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109298904 (ATG13)
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109298904 (ATG13)
Membrane trafficking [BR:
ggn04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109298904 (ATG13)
Atg1 complex
109298904 (ATG13)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109298904 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
PCM1_C
Motif
Other DBs
NCBI-GeneID:
109298904
NCBI-ProteinID:
XP_019374832
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRATAEDNVA
VYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADMGYPVVFAGGLNAAHPHQ
LIVPGKEGGVPPVPSQPPHATQADQERMAMCTPLDGAHYSAATPSSSEDTETVSNSSEAK
SGSPHDILETIFVRKVGAFVNKPINQVTMANLDIPFAMFAPKNIELEDNDPMVNPPDSPE
TESPLLGSLHSEGSSGNSTGNTHDDFVMVDFKPAFSKDDILPMDLGTFYREFQNPPQLSS
LSIDIGAQSMAEDLDSLPEKLAVHEKNVKEFDAFVETLQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagctcccaagacaggaaggacctggacaagttcatcaaatttttt
gctttgaagactgtacaagtgattgtccaggccagacttggagagaaaatctgtactcga
tcatcctcttcaccaacaggctctgactggttcaacttggcaatcaaagatataccagaa
gttactcatgaagcaaagaaagccttggcaggacagctacctgctgttggacggtcaatg
tgtgtggagatctctcttaaaacctcagagggagattccatggagttggaaatctggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcttacactgtgtacaacaga
ctgtctctacttctgaagtctttgcttgctattacccgggtaactccagcctacagactc
tccaggaaacagggccatgaatatgtaatactgtacaggatatacttcggagaagtgcag
ctgagcggcttgggagaaggtttccaaacagtccgcgttgggacagtgggtactccagtg
ggcaccatcactttgtcttgtgcctacagaatcaacctggccttcatgtcaacacggcag
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctac
cccagctcttcacccatgcacccctgcaattacagagcaactgctgaggacaatgtggca
gtatatccatcagtggaagactctcaggaagtgtgcaccacttctttttccacttcccct
ccatcccagctttccagctctcgtctttcctatcagcctgctgccctgggagttggatca
gctgacatggggtatccagtagtctttgctggtggcttgaatgctgcacatcctcatcag
ctgattgtgccagggaaggagggtggggtgcccccagttcctagccagccaccacatgct
actcaagctgaccaagagaggatggcaatgtgcacccctttggatggagcccactactca
gcagctactccttccagtagcgaggacacagagacagtatcaaacagcagtgaagcgaag
agtggctccccacatgatatcttggagaccatctttgtccggaaggtgggggcctttgtc
aacaaacctattaatcaggtgaccatggccaacttagacattccttttgccatgtttgct
cccaagaacattgagctggaggataacgaccccatggtgaatcctcctgactccccagaa
actgagtctcctctactgggcagcttacattcagagggctcaagtggtaacagcaccggg
aacacacatgatgattttgtcatggttgattttaaaccagcattttcaaaagatgacatt
ctcccaatggacctggggacattctaccgtgagtttcagaacccccctcaactcagcagc
ctctccattgacatcggggctcagtccatggcggaggatctggactcattaccagagaag
ctggcagtccatgagaaaaacgtcaaagagtttgatgcctttgtagagaccttgcagtga
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integrated database retrieval system
