Gavialis gangeticus (Gharial): 109298908
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Entry
109298908 CDS
T07453
Symbol
AMBRA1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04137
Mitophagy - animal
ggn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109298908 (AMBRA1)
04137 Mitophagy - animal
109298908 (AMBRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109298908 (AMBRA1)
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109298908 (AMBRA1)
Membrane trafficking [BR:
ggn04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
109298908 (AMBRA1)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
109298908 (AMBRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
109298908
NCBI-ProteinID:
XP_019374840
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTQALGAQRLLQELVEDKTRWMKWEGKKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEEVEIPVDSTEMPHYRQRSILQSQPVRRTPLL
HNFLHMLSSRSSGIQTEPYQPPEQASVAQEDQGILNRPSAFSTVQSNTAGNTLRNLSLGP
TRRSLSGPLSGHPSRYQQSTREMASGLGGSDWTRTVLNMGSRSELEAMPPPRTSASSVSL
LSVLRQQEGGSQSSVYTSATEGRGFLAPGAEADGSGSASPSNPSSIRNELQCDLRRFFLE
YDRLQELDQGIGGEPSQSQQAQEMLNNNIEPDRPGPSHQQTPHSSENNSNLSRGHLNRCR
ACHNLLTFNNDTLRWERSTPSYTSGQVQNTFEGVPPSSSQVQPAERTEGRASTSSRLQLG
SSSNPSEERTVGVVFNQETGHWERVYSQSASSRPGNVSQEALNQEMPEESSEEDSLRRRL
LESSLISLSRYDGAGSREHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRL
RSSSSSASSSETQGSSVEGNDLEFEEFEDNGDRSRHRAPRNARMSAPSLGRFVPRRHLLS
KXLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDL
PEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLG
EMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQQPHGGETSMR
RVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGVEYYWDQL
NETVFTVPSSNRSTERTGTSRATWRTDRDMGLMNAIGLQPRNPTTSVTSQGTQTLAPQLQ
NAETQTEREVQEQGATSSGTGEGEGPEYGASGEDALTRIQRLMAEGGMTAVVQREQSTTM
ASMGGFGNNIIVSHRIHRSSQTGVESTGADGTTAQQSTSHQLAAELEGRILSESMQLSEH
GLSPRTASGGSEGQGSDGQDLPEQAQSLMDTEGPVEYSDLTNNNHLPDSTNFSSTDSTSG
GSRNR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtaccagaaaagaacgctgtgcggatcctctggggacgggaacggggcacc
caagctttgggtgctcagcggcttctacaggagctggtggaggataaaacccgatggatg
aaatgggagggcaagaaagttgagctaccagacagcccacggtccaccttcctgcttgcc
ttcagcccagacagaacgctcatggcttccacccatgtgaaccacaatatctatatcaca
gaggtgaaaacgggaaagtgtgtgcattctctggttggacatcggcgcacgccctggtgt
gtgacctttcaccctaccatccctggactcattgcttcagggtgccttgatggggaggtt
aggatctgggatttacatggtggaagtgagagctggttcacagatagcaacaatgccatt
gcatcccttgctttccatcctacggctcagcttctgctgattgcaacagccaatgaaatt
cacttctgggattggagtcgtcgagagccttttgcagtggtgaagacagccagtgagatg
gaacgggtccggctggtgcggtttgatcctttgggacactatttgctcactgcaattgtt
aatccttccaaccaacagagtgatgaagaagtggagatccctgtagacagcacagagatg
ccacattaccgtcagcgttctattctccagtctcagcccgttaggcgcaccccccttctc
cacaacttcctgcatatgctgtcctcgcgctcttctggcatacagacagagccctatcaa
cctccggagcaggcatctgtggcacaggaggaccaggggatacttaacaggccatctgct
ttcagcactgttcagagcaacactgctgggaacactctccgcaaccttagcctgggtcct
actcgtaggtccctcagtgggcccttgtcagggcacccgtccaggtaccaacagtctaca
agagagatggcttctggcttaggagggtctgattggactagaacagtgctgaacatgggt
tcccgctcagagttggaagccatgcctccacctagaaccagtgcctcttcagtgagcttg
ctatctgtgctgagacagcaggagggaggttctcagtcttctgtgtatacatctgctaca
gaagggaggggcttcctggcaccaggagctgaagcagatggcagtggcagtgctagccca
agcaatccatccagcatccgcaatgagcttcagtgtgacttgagacgttttttcttggaa
tatgaccggcttcaagagctagatcaagggattggtggggaacccagccagtcacaacag
gctcaggaaatgctgaacaacaacattgagcctgataggccaggtccttctcaccagcag
actccacatagcagtgaaaacaattccaatttgtcacggggtcacctgaaccgctgtcgc
gcctgtcacaacctgctgacctttaacaatgacacactacgctgggaacgaagcacacct
agctacacatcggggcaggtccaaaacacatttgagggcgtgccaccaagcagcagccag
gtgcagcctgcagagagaaccgagggccgagcttctacttctagcaggttgcagctggga
agctcttccaacccatcagaggaaaggaccgtgggagtggtgtttaaccaggagacgggg
cactgggaaagagtttacagccagtcggcttcaagcagacccgggaatgtatcacaggag
gccttaaaccaggaaatgcctgaggaaagttcggaggaggattcactcaggaggaggctg
ctggagtcttccctcatttcattatcacgctacgatggagcagggtcccgggaacaccct
atctaccctgatccagccagattgtcacctgctgcatattacgcccagagaatgatccag
tatctttcccgaagggatagcattcgccaacgctccatgcgataccaacaaaaccgtctc
cgctcttcctcctcttctgcttccagctcggagacccagggctcctctgtagagggaaat
gatttagagtttgaagaatttgaggacaatggagacagatcacggcaccgagctccccgg
aacgcccgcatgtctgcaccatcactggggcgcttcgtccctagaaggcatcttttaagt
aagnnnttgccttatgctgggattttccatgaacgtggacagcctggcttggccacccac
tcatctgttaacagggtcttggcaggggctgtgattggagacggacagtctgctgtggcc
agtaacattgccaacaccacctaccggctccagtggtgggacttcaccaagtttgacctg
cctgaaatcagcaatgcctctgtaaatgtgcttgttcagaactgcaagatttacaatgat
gccagctgcgatatctctgcagatgggcagctcctggcagccttcattcccagtagtcag
cggggctttcctgatgaaggaatactggctgtgtattctctggcaccccacaacctgggc
gagatgctttatacaaagcgatttggtcccaatgccatttctgtgagtctgtctccaatg
ggcaggtatgtgatggtcggactggcctcccgacgcatcctgctgcacccttccacagaa
cacatggtggctcaagtcttcagactgcagcagccacatggtggagaaacttccatgagg
agagtcttcaatgtcctgtacccaatgcctgctgaccagagaagacatgtcagcataaat
tctgctcgctggctgcctgagccaggtcttggtttggcatatggcaccaacaagggggac
ctggtgatttgccgaccagaggccttaaactctggagttgagtactactgggaccagctg
aatgagactgtcttcactgtgccttccagcaataggagcactgagcggactggaaccagc
agagccacatggagaacagacagagacatgggcctaatgaacgccataggcttgcagccc
cggaaccctaccacctcggtgacctcacaggggacccaaaccttggctcctcagctgcag
aatgcagagactcagacagagcgtgaggtgcaggagcaaggagctacctcctcagggact
ggagaaggagaaggtcctgaatatggggccagtggggaagatgcccttaccaggatccag
cggctgatggctgagggtggcatgaccgctgtggtccagcgagagcagagcaccaccatg
gcgtccatgggtggctttggcaacaacatcattgtgagccaccggattcaccgcagctct
cagacaggggtggagtccaccggagctgatggcaccacagcacagcagtccacctcgcac
cagctggcagctgagctggagggccgaatcctttccgaatccatgcaactgtcagaacat
ggcctgagcccgcggacagcctctggtgggagcgaaggtcaaggaagcgatgggcaggac
ctgccagagcaggcccagtccttgatggacacggagggaccagttgaatacagtgaccta
actaataataaccatcttcctgacagtaccaacttctctagtaccgacagcaccagtggg
gggtcgcgaaacaggtag
DBGET
integrated database retrieval system
