Gavialis gangeticus (Gharial): 109298949
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Entry
109298949 CDS
T07453
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
109298949 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109298949 (RAG1)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109298949 (RAG1)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109298949 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_UBOX
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
109298949
NCBI-ProteinID:
XP_019374925
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MEMLPPPSMNLPEEIQHPYTKFSEWKFKLFKVRPFEKTPPGDSQVVNKDKAEEVSSLDKG
SVLHMDAVIPVMDKPVVVQAELKGTKQTLEKDANNLKMQDNATHQANLEALCRICGISFK
TDRYRRSYPVHGPVDNETQGLLRKKEKKATSWPDLIAKIFKIDVRGDIDTIHPTRFCHNC
WSIIQRKFSSSPYEVYFPRNSTMEWQPHSPNCDVCHTSCRGIKRKKQPPNLQLAKRLKII
AERARKNRCGKNQGKINNKNLMKKITNCKKIHLSTKLLAVDYPVDFIKAISCQICEHILS
DPVETTCRHLFCRTCILKCLKVMGSYCPSCLYPCFPTDLVTPVRSFLNILDALTLRCPVK
ECDEEILLGKYGQHLSSHKEMEGKDVYTHINKGGRPRQHLLSLTRRAQKHRLRELKLQVK
TFAEKEEGGDIKAVCMTLFLLALRAKNEHRQADELEAIMQGRGSGLHPAVCLAIRVNTFL
SCSQYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSANTEVGIID
GLSGLPHSVDDYPIDTIAKRFRYDAALVSALMDMEEDILEGMKAHDLDDYLNGPFTVVVK
ESCDGMGDVSEKHGCGPAVPEKAVRFSFTVMTITITHGNANVRIFEEVKPNSELCCKPLC
LMLADESDHETLTAILSPLIAEREAMKSSVLLLEMGGILRTFKFIFRGTGYDEKLVREVE
GLEASGSTYICTLCDATRLEASQNLVLHSITRSHAENLERYEVWRSNPYHESVDELRDRV
KGVSAKPFIETVPSIDALHCDIGNAAEFYKIFQFEIGEVYKNPDASKEERKRWQSALDKH
LRKKMNLKPIMRMNGNFARKLMTKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSS
CPAKECPELLCQYSFNSQRFAELLSTKFQYRYEGKITNYFHKTLAHVPEIIERDGSIGAW
ASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGFTV
DPEYSLEDSLELEDSLETNNSMEF
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggagatgttaccaccaccaagcatgaacctgccagaagaaatccagcatccatacact
aagttttcagaatggaaattcaagctgtttaaagtaagaccatttgaaaagacacctcct
ggggatagccaagtggtaaataaagataaagcagaagaggtgtcctctttggacaaaggc
agtgtgctacatatggatgcagtaatcccagtgatggataaaccggttgtggtacaagca
gaattaaaaggcactaagcagacacttgaaaaagatgccaacaatctgaagatgcaagat
aatgcaacacatcaagcaaatctggaggcactttgccgcatctgtggaatttcattcaaa
actgaccgctacagaagaagttatccagtgcatggaccagtggacaatgaaactcagggg
cttttgagaaagaaagagaaaaaagcaacatcttggccagatcttattgccaagatcttt
aagattgatgtgcgaggagatattgacacaattcaccctactcgattttgtcacaattgc
tggagtatcattcagagaaagttcagcagttccccatatgaggtttatttcccgaggaac
agcaccatggaatggcagcctcactccccaaattgtgatgtttgtcacactagctgtcgg
gggatcaagagaaagaagcagccgccgaacttacagcttgcaaaacgattgaagatcatt
gcagaacgtgctcgaaaaaacaggtgtggaaagaaccaaggaaagataaacaacaagaac
ctcatgaaaaagattaccaactgcaagaagatacatcttagcacaaagcttcttgcagtt
gactatccagtagatttcattaaggctatctcttgtcagatctgtgagcacattctgtca
gatccagtggaaacaacgtgtaggcacttattctgcagaacctgcatccttaaatgtctc
aaagttatgggcagttattgcccctcctgcttgtacccttgcttccctactgacctagtg
accccagtgagatccttcctaaacatccttgatgctctgactctgagatgcccagtgaaa
gaatgcgatgaagagatcttgctggggaaatatggtcagcatctctccagccacaaggag
atggaagggaaagacgtttacacacacataaataaaggggggcgaccaagacaacacctt
ctgtccttgaccagaagagctcaaaaacatcgtctgagagaactcaagcttcaagtcaaa
acatttgctgagaaagaagaagggggagatataaaggctgtttgcatgactttgtttttg
ttagctctcagagcaaaaaatgaacaccggcaagcagatgagctggaagctataatgcaa
gggaggggctcagggcttcacccagctgtttgtttggcaattcgagtcaatacatttctc
agctgtagtcagtaccataaaatgtacagaactgtaaaagctgtcactgggaggcagatc
ttccagccattgcatgctcttcgcactgctgagaaagccctgctcccaggttatcatcca
tttgagtggaagcctcctttgaaaaatgtgtctgccaatacagaagtgggaattatagat
gggctttcaggcctgccacactcagttgatgactacccaattgacacaattgcaaagagg
tttcgatatgatgcagccttggtttctgccttaatggatatggaagaagacatcttggaa
ggcatgaaagcacatgacctggatgactatttgaatggtcctttcactgtggtggtgaag
gagtcttgtgatgggatgggagatgtcagtgagaagcatggatgtggaccagcagtccca
gaaaaggcagttcgcttttctttcaccgtcatgaccatcactataactcatggcaatgca
aatgtaaggatctttgaagaagtcaagcccaattcagagctatgttgcaagccattgtgt
cttatgttagctgatgagtcagaccatgagactctgacagccatcctgagccctctcata
gcagaaagagaggccatgaaaagcagcgtactacttcttgaaatgggaggcatcctcaga
acattcaaattcatctttaggggtacggggtatgatgagaaacttgtgcgtgaggtggaa
ggccttgaagcttctggctccacttacatttgtaccctctgtgatgcaacccgcctagaa
gcctctcagaatttggtcctccactccataacaaggagtcacgctgaaaatctagagcga
tatgaggtgtggaggtccaacccataccatgagtccgttgatgagctccgtgatagagtg
aagggtgtttctgcaaaaccatttattgagactgttccctctatagatgcattgcactgt
gacattggcaatgcagctgagttttacaagatattccagtttgagataggtgaagtctac
aagaaccctgatgcatctaaagaagagaggaagaggtggcaatcagctcttgacaagcac
ctgaggaagaagatgaacctgaaaccaataatgaggatgaatggaaactttgctagaaag
ctcatgactaaagagacagtggaagcagtttgtgaattaatcaagtgcgaggaaaggcat
gaagccctcaaagaattgatggatctctacctgaagatgaaaccagtgtggagatcttca
tgtcctgccaaggagtgcccagaactgttgtgccagtacagtttcaactcacagcgtttt
gctgagctcctatccacaaagttccagtatagatatgagggcaaaattacaaattacttt
cataaaactcttgctcatgttcctgaaatcatagaaagagatgggtccattggtgcctgg
gcaagtgaaggaaatgaatctgggaacaaattgtttagacgtttccgaaaaatgaatgcc
aggcagtcaaaatgctatgaaatggaggatgtcctgaagcaccattggctgtatacatct
aagtatctgcaaaagttcatgaatgctcataaaacattgaaaagccagggcttcacagtt
gatccagaatacagtttagaagactccctggaattggaagactctttggaaaccaataat
tctatggaattctaa
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integrated database retrieval system
