Gavialis gangeticus (Gharial): 109299132
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Entry
109299132 CDS
T07453
Symbol
USH1C
Name
(RefSeq) harmonin isoform X1
KO
K21877
harmonin
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ggn03037
]
109299132 (USH1C)
Cilium and associated proteins [BR:
ggn03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109299132 (USH1C)
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Ortholog
Paralog
GFIT
Motif
Pfam:
USH1C_N
PDZ
PDZ_6
PDZ_2
Baculo_LEF5_C
FapA
DUF1168
Motif
Other DBs
NCBI-GeneID:
109299132
NCBI-ProteinID:
XP_019375214
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MERKVAREFRHKVDFLIDNEAEKDYLYDVLRMYHQSMDLPVLVGDLKLVINEPSRLPLFD
AIRPLIPLKHQVEYDQLTPKRSRKLKEVRLDRLHPEGLGISVRGGLEFTCGLFISQLVKG
GQADNVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKIVSIKVRHVGMIPVKSSADEPL
KWQYVDQFVSDAGEGKGSMAGLISSGGRDSKEKKVFISLIGTKGMGCSISSGPTQKPGIF
ISNVKPGSLSAEVGLEVGDQIVEVNGVDFSKVDHKEAVRVLKSSRTLTISVVAGAGKELF
MTEEERQREERLHELERQELMHQKRVALETNKIFKEQQEKEKLRKQEMTQKTAEEEERYH
KEIGQITAEEEKFKKQWEEDWAPKEPPKTVKTVTAEVHRAPSPKHRVDLKGVARDQLTAD
DMDGMSMKQDKQGFQKYVENFDPYSMFSPDQVMGKDVRLLRIKKEGALDLAVEGGIDSPI
GKIVVSAIYEGGAADKHGGIVKGDEIMAVNGKILVDAKLAEAQTTLSRAWNMGGDWIDLV
IAASPPKEYDDEMTFF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcaaggtggcccgggagttccggcacaaggttgacttcctcattgacaatgaa
gcagagaaggattatctttatgatgtgctgcggatgtaccaccaatccatggatcttcca
gtgctggtgggagacctaaagcttgtgataaatgaaccaagtagattgcctctttttgat
gccatccgtcctcttatcccattaaaacaccaggtggaatatgatcagttaacaccaaaa
cggtcaagaaagctgaaggaagtgagactggatcgtttgcatcctgaagggcttggaata
agtgtgcgaggaggactggaatttacctgtgggctctttatctctcagttagttaaaggt
ggacaagcagacaatgttggacttcaggttggagatgagatagttcggataaatgggtac
tccatctcttcatgcactcatgaggaagtaataaatcttatccgcacaaagaaaattgtg
tccataaaagtaagacatgtcggcatgatacctgtcaaaagctctgcagatgaacctctt
aagtggcaatatgtggatcagtttgtgtcagatgctggggaaggaaaaggcagcatggca
gggctcatttcatctggaggaagagacagtaaagagaagaaagtcttcattagtttgatt
ggtacgaagggtatgggatgcagcatttccagtggtccaacacaaaaaccaggcatcttt
attagcaatgttaagccaggatctctttctgcagaagtgggattagaggttggtgatcag
attgttgaagtaaatggagtggatttttcaaaagtggatcacaaagaggctgtgagagtg
ttaaaaagcagtcgtacactgactatctctgtagtagcaggagctggaaaagagcttttc
atgaccgaagaagagcggcagagagaggagcgccttcatgaactggagcgtcaggagtta
atgcatcaaaagcgggtcgcgttagagacaaataaaatcttcaaagaacagcaagagaaa
gagaagttaagaaaacaggagatgactcagaagactgcagaggaagaagaaagatatcat
aaagaaattggacagataacagcagaggaagagaaatttaagaaacaatgggaagaggac
tgggcacctaaagagccacctaaaactgtaaaaactgtgactgctgaagttcaccgtgcc
ccttctcctaaacacagagtagatttaaagggagttgcacgtgaccagcttacagcagat
gacatggatggaatgagcatgaagcaggacaaacagggcttccagaagtacgttgaaaat
tttgacccttattcaatgttttcaccagaccaagttatgggaaaagatgtgcggctgctg
cgtattaaaaaggaaggggcattagaccttgcagtagagggaggaattgattctccaatt
gggaaaatagttgtctctgctatctatgagggtggtgctgcagacaaacatggcggcata
gtgaaaggggatgaaataatggcagtaaatggaaagattttagttgatgctaaactggca
gaagcacagacaactctatcgagagcatggaacatgggtggggactggattgacttagtc
attgcagcatctcctccaaaggaatatgatgatgaaatgacatttttttaa
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integrated database retrieval system