Gavialis gangeticus (Gharial): 109299144
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Entry
109299144 CDS
T07453
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03022
Basal transcription factors
ggn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109299144 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
109299144 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109299144 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109299144 (GTF2H1)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109299144 (GTF2H1)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109299144 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
109299144
NCBI-ProteinID:
XP_019375229
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNAVDSSAAHNKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNLTEREFWTRFFQSHYFHRDRVNTGSKD
LFAECAKMDEKGLKTMVSQGVKNPLLDLMALEDKSLDEGYGVASAPSTSNSSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAHNDHCSETSSTDGNSRDSDFFQPPMKRVKLQESIEY
EDLRKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYVPKLTQ
VLSSGDAASTITALSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAAGELLRHFWSCFP
VNTPFLEEKVMKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHMWQ
TRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcttctgaagaagtgttactgatagtgaagaaggtgcgtcaaaagaagcag
gatggggctctctaccttatggctgaaaggatagcctgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtatgcagacataaaatgccagaaaattagtcctgaaggaaaa
gctaaaattcaacttcagctggtattgcatgcaggggacacaaccaacttccacttctcc
aatgaaagcacagcagtgaaggaaagagatgcagtgaaggaccttcttcagcagctgctg
cccaaattcaagaggaaagctaataaggaacttgaagaaaagaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagccaggtaatcagtgctgag
gaattctgggccaaccgtttaagcatgaatgcagtggatagttctgcggcacataataag
caggatgtgggcatctctgcagcatttctggctgatgttcggcctcaaacggatggttgc
aatggtctgaggtataacttaacctcagatatcattgaatccatatttagaacatatccc
gcagtaaaaatgaaatatgcagaaaatgttccacataacctgactgaaagggaattctgg
acgcgatttttccagtcccactattttcatcgggatagggtgaacacaggttcaaaagat
ctctttgctgaatgtgccaaaatggatgagaaagggttaaaaacaatggtgtctcaagga
gtgaaaaatcctctgttagatttaatggccttggaagataaatctttagatgagggttat
ggtgttgcctctgcaccatccacatcaaactcatcaaaatcgataaaagaaaatagcaat
gctgccattataaaacgctttaaccatcacagtgccatggttcttgcagctgggctcagg
aaacaagaagcgcacaatgatcattgtagtgagaccagcagcacagatggaaactccaga
gattctgatttctttcagccaccaatgaaaagggtgaagttacaggaatctattgaatat
gaagatttaagaaagaataatagcattaaaactattgcactaaacctaaagaaatctgat
cggtattatcatggtccaactccaattcagtcacagcaatatgcaaccagtcaggatatt
attaattcttttcatagtattagacaagaaatggaagcctatgtacccaaactaactcag
gttctttcaagtggtgatgctgctagcaccatcacagccctatcacctgggggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgatgttcagtctgaa
ctgaaacacttgtatgtggctgcaggggagctactgcgacacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggttatgaaaatgaggagtaatttggaaagattt
caagttacaaagctctgcccattccaagaaaaaatccggagacaatatttaagcacaaac
ttggtaagtcatatagaagagatgttgcagacagcctacaataagttccacatgtggcaa
acccggcgtatgttaaagaaaacgtga
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