Gavialis gangeticus (Gharial): 109299214
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Entry
109299214 CDS
T07453
Symbol
DEAF1
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109299214 (DEAF1)
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109299214 (DEAF1)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
109299214 (DEAF1)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109299214 (DEAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAND
zf-MYND
DUF5649
COG4_N
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
109299214
NCBI-ProteinID:
XP_019375343
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MAADAEHIEMGTESLPSADTAFAEVTTVTVANVGASADNVFTTSVANAASISGHVLSGRT
ALQIGDSLNTEKATLIVVHTDGSIVETTGLKGPSAPLTPGPQSPPTPLTPGQEKSGTKYN
WDPSVYDNELPVRCRNISGILYKNRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWK
RSIRYAGRPLQCLIHDGILNPHAASCTCAACCDDMTLSGPVRLFVPYKRRKKENEMPTTP
VKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAIISESPSQGDVFTG
ATVQDTNVQQPCRVSHPEPHYPSYQDNCQISPFPEAALPTSHPKIVLTSLPALAVPPTTP
TKAISPSVVNGLEMTEQRSWLYLEEMVNSLLNTAQQLKTLIEQAKQASSSFREAAVTQAK
IQADVERKEQYQNQLFQQTEDVDGKTEIIIKQSCVNCGREAMNECTGCHKVNYCSTFCQR
KDWKDHQHMCGQSATVTVQADEDNVIEKVTV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacgccgaacacattgagatgggcaccgagtccctgccgagcgctgacacc
gccttcgcagaagtgaccacggtgaccgttgccaatgtgggtgcctctgcagacaatgtc
ttcaccacatctgtggcaaatgcagcatctatttctggacatgtgctgtctggaagaaca
gcccttcaaattggggacagcttgaatactgaaaaagccactctcatagtggtccacaca
gatggcagcattgtagaaaccacagggttaaaggggccctcagcacctctcacgccaggt
cctcagtctccccctacgcctttaacacctggtcaagaaaaaagcggaacaaagtataac
tgggacccatcagtgtatgacaatgaacttcccgtgcggtgccgtaacatcagtggaatc
ctatataaaaacaggcttggctcaggaggccggggccgatgcattaaacaaggagaaaac
tggtacagccccactgaatttgaagccatggcaggaagggccagcagcaaggactggaaa
agaagtatccgctatgctgggaggccactacagtgccttattcacgatgggattttaaac
cctcatgctgcctcttgcacttgtgctgcctgctgtgatgacatgaccttgagtggccca
gtgcgactctttgtaccatataaaaggcggaaaaaagagaatgaaatgcctacaactccg
gtgaaaaaggattctcctaaaaacatcaccctgcttcctgccacagctgctaccactttc
accgtgactccttctggacagatcactacctctggtgctctgacttttgaccgtgcatcc
actgtggaagccacagctatcatctcagaaagtccatcccaaggcgatgttttcactgga
gccactgtacaggatactaatgtccagcagccttgtcgggtcagtcatccagaaccccac
tatccaagttatcaggacaactgtcagatttcaccttttccagaagccgcactgccaact
tctcatcccaaaattgtgttgacttcacttcctgccctggctgtgccacccactacccct
accaaagccatatccccttcagtggtgaatgggctggagatgacagagcaacggagctgg
ctgtacctggaggagatggtcaactccttactcaacacagcccagcaactgaagactctg
attgagcaggctaaacaggccagctcctccttccgtgaggctgctgttactcaagcaaaa
attcaagctgacgtggagaggaaagagcagtatcaaaaccagttatttcaacaaacagaa
gatgtggatggaaaaacagaaatcatcatcaagcagtcgtgtgtcaactgtggccgggag
gctatgaacgagtgcactgggtgtcacaaagtgaattactgctctactttctgccagcgg
aaggattggaaagatcaccagcatatgtgcggtcagtcagccaccgtcacagttcaagca
gacgaggacaatgtaatagagaaagtcacagtctga
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