Gavialis gangeticus (Gharial): 109299376
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Entry
109299376 CDS
T07453
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109299376 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109299376 (CSTF3)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109299376 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
DUF2971
Motif
Other DBs
NCBI-GeneID:
109299376
NCBI-ProteinID:
XP_019375508
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MYQARLVNAEMAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLV
AQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSY
KEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVN
PMINIEQLWRDYSKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVP
PQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAA
QYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEK
VHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALM
EYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPP
EKSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSA
SELKALGYKDVSRAKLAAIIPDPVVAPSIAPVLKDEVDRKPEYPKPDTQQMIPFQPRHLA
PPGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVHVDELMEIFRRCKMPETVDEAIRI
ITGGLPDLTVEGNGPVENNAMLNKAVKRPNEDSDDEEEKGSVVPPVHDIYRARQQKRIR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaggcgcggctcgtgaacgctgagatggctgctgaatatgtcccagaaaaagtg
aaaaaggctgaaaagaaattagaagaaaatccatatgaccttgacgcttggagcattctc
attcgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgtt
gcccagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagca
aaaaattatgacaaagtggaaaagttgtttcagagatgccttatgaaggttttgcacatt
gatttatggaaatgttatctttcatatgtacgagaaaccaaggggaaactacctagttac
aaagagaaaatggctcaggcatatgattttgctctggataaaattggcatggaaatcatg
tcatatcagatctgggtggattacatcaattttttaaaaggcgtagaagctgtaggatct
tatgcagaaaatcagaggataacagctgttcgtagggtttaccagcgaggttgtgtgaat
ccaatgatcaacatagaacaactctggagagactatagcaaatatgaagagggaatcaat
attcacttagctaagaaaatgattgaagatcggagtagagattatatgaatgctagacgg
gtggctaaggaatatgaaactgttatgaaaggtcttgatcgtaatgctccctccgtcccc
ccacaaaatactccgcaggaggctcagcaggttgacatgtggaaaaaatacatccagtgg
gaaaaaagtaatcctctgcgtacagaagaccaaactctcataacaaaaagagttatgttc
gcttacgaacaatgtcttttggtcctggggcatcatcctgatatctggtatgaagctgca
cagtatcttgagcaatccagtaaactgctagctgagaaaggggacatgaacaatgctaaa
ctgttcagcgatgaggctgctaatatttatgaaagagcaatcagcactttactaaagaag
aacatgcttctttactttgcctatgcagactatgaagagagtcgaatgaaatatgagaag
gtacacagcatatataaccggctcttggccattgaagatattgaccccactttggtgtac
atccagtacatgaagtttgcaaggcgagcagaaggtatcaaatctggaagaatgatattc
aaaaaagctagagaggatgcccgtactcgccatcatgtctatgttacagcagcattgatg
gagtattactgtagtaaggacaagtcagtggcctttaagatttttgaattggggctgaaa
aaatatggagacattccagaatatgtattggcatatattgactatctgtctcaccttaac
gaggacaataacacaagagttttatttgaacgtgtgttaacctcgggaagccttccacct
gagaaatctggagaaatctgggcccggtttttagcttttgaaagtaacattggtgatcta
gctagcattcttaaagtagaaaaacggcggtttacagcatttaaagaagaatacgagggc
aaagaaactgctctgctggtagatagatacaagttcatggatttatacccttgttctgca
agtgaacttaaagctctgggttacaaggatgtctcacgtgccaaactagcagccataatt
ccagacccagtagtggctccttccatagcgcctgttctaaaagatgaagtggacagaaaa
cctgaatatcccaaaccagacacacagcagatgattccatttcagccaagacacttagca
cctccaggtttacatcccgtgccaggcggcgtcttcccagtcccaccagctgctgtagtt
ttaatgaaactccttccacctcctgtttgttttcagggcccttttgtgcatgtggatgaa
ctcatggaaattttccgaaggtgcaaaatgccagaaactgttgatgaagctataagaata
attactggaggcctgcctgacctaactgtagaaggtaatggacctgtggagaataatgcc
atgctcaataaagctgtcaagagaccaaatgaagattctgatgatgaagaggagaaagga
tccgtggttcctcctgtacatgacatttacagagcacgacagcaaaagagaatccggtga
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integrated database retrieval system
