Gavialis gangeticus (Gharial): 109299639
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Entry
109299639 CDS
T07453
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109299639 (PRDM1)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109299639 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
CapR
Motif
Other DBs
NCBI-GeneID:
109299639
NCBI-ProteinID:
XP_019375695
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MKAATQCSSDSVSFKLLVKGTDWTMKMNMEDADMTLWTEADFEEKCTYIVNDHPWDPSTD
GGNITQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTTDTVPKNANR
KYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGHSVQEQNLAACQNGMNIYFYTIKPIPA
NQELLVWYCRDFAERLHYPSSGELTMMNLTRGHNNPKQQSTDKDELYQKSIPKKEHSVKE
ILKTESNPSKGKDLFQTNISPVTPEKNLDDLRKNCSPERCFFPRVIYPIRPHMPEDYLKA
SLAYGMERPNYITPSPIQSSTTPSPSARSSPDQSLKSSSPHSSPGVTVSPLAPTSQEYRE
SYPFLNGPHGSEGLGSYPGYAPSSHLSPAFLSSYNSHYPKFLLPPYSMSCNNLSALNNIN
GINNFNLFPRIYPLYGNILGGGSLSHHVLNPAALPGSLPSEGSRRLLQPDHPRDFLMPAP
NSAFSITGAAASMKDKPCSPTSGSPQAGTAATSEHIMQPKPTSAVLAATSSEEAMNLIKS
KRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGF
TQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFV
HLKLHKRLHTRERPHKCVHCHKSYIHLCSLKVHLKGNCPVAPASGLSVEDLNRINEEIEK
FDISDNADKLEDMEDNIDMTSVVEKEILTMLRREIEGANLKVSLQRNLGNGLISSGCNLY
ESSDMSIMKLPHGHPLPLLPIKVKQETIEPMDP
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgccacacagtgtagctcggactctgtgagtttcaaactgcttgtaaaaggg
acagactggacaatgaaaatgaacatggaggatgctgacatgactttgtggacagaggct
gattttgaagagaagtgcacgtacatcgtaaatgatcacccatgggatcctagcactgac
ggaggcaacataactcaggcagaggcttccttgccaaggaacttgactttcaaatatgca
tcaaactgtaaagaggttactggagttataagcaaagagtacatcccaaaaggaacacgc
tttggacccctggtaggagagatctataccaccgatacggttcccaagaatgcaaacaga
aaatacttttggcggatctattccagtggtgagcttcaccacttcattgatggatttaat
gaggacaagagcaactggatgcgctatgtgaatccaggccattctgttcaggaacagaac
ttggctgcttgtcaaaatggaatgaacatctacttctacaccatcaagcccatccctgcc
aaccaagaactacttgtgtggtattgtcgagactttgcagagagacttcactatccttcc
tccggagagctgacgatgatgaatctcacacgaggccacaataacccaaagcagcaaagc
actgataaagacgaactttatcagaaaagcatcccaaagaaagagcacagtgtgaaagaa
atcctgaaaactgaatccaacccttcaaaaggaaaggatttattccagaccaacatttca
ccagttactccagaaaaaaacttggatgatttgagaaaaaactgtagccctgaaaggtgt
tttttcccacgagttatctatccaatccgacctcacatgccagaagactatttgaaagct
tccctagcttatgggatggaaagacccaactatattacaccgtcccccatccagtcttct
accacaccaagtccttcagcaaggagcagcccagaccaaagtttaaaaagttcaagccct
cacagcagtccaggggttactgtttcacctctggcacctacttctcaagaatacagagaa
tcctaccctttcttgaatggaccccatggctcagaaggattggggtcttatcctggatat
gcaccctctagccatctctctccagcctttttatcctcctataattcccactatccaaaa
ttcctgttacctccatacagtatgagctgtaataacctgagcgctttgaacaatatcaat
ggcatcaataatttcaatctcttcccaaggatatatcctctctatggcaacatactgggt
ggaggcagcctgtcccatcatgtgctgaaccctgctgctcttccaggttcactgccatct
gaaggaagccgtagattgctacaacctgatcatccaagagacttcctcatgccagcacct
aacagtgccttttccatcacgggcgctgctgccagcatgaaagacaaaccatgcagcccc
acaagtgggtcccctcaagctggcacagcagctacttcagaacatataatgcaacctaaa
cctacctcagcagtgttggctgccaccagcagtgaagaagccatgaatctcattaaaagt
aagaggaacgtgactggttacaaaactcttccatatccactgaagaagcagaatgggaag
atcaaatatgaatgcaatgtttgctctaaaacctttggccagctctcaaatctgaaggtc
cacctgagagtgcatagtggtgagaggcctttcaagtgtcagacttgcaacaaagggttt
acccagctggctcacctccagaagcactatctggtccacacaggcgagaagccccacgag
tgccaggtttgccacaagcgattcagcagcaccagcaacctaaagacccatcttcggctc
cactctggagaaaagccttaccagtgcaagttgtgccctgctaaattcacccagtttgtg
catctgaagctgcacaagcgtcttcacaccagggaacgtccacacaagtgtgtccactgt
cataagagctacattcacctctgcagcctcaaagtccacctgaagggcaactgcccagta
gcccctgcctccggcctctcagtggaggatctaaatcgtatcaatgaagagatcgagaag
tttgacatcagtgacaatgctgacaagctggaagatatggaggacaatatcgacatgaca
tcagttgtggaaaaagaaatattgaccatgctcagaagagaaatagaaggagctaatctt
aaagtatcattgcagaggaacctgggaaatggacttatctcctcaggatgcaacctctat
gaatcttcagatatgtccattatgaagttgcctcatggtcatccactacctctgttacca
ataaaggtcaagcaagaaacaattgaaccaatggacccttaa
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