Gavialis gangeticus (Gharial): 109299821
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Entry
109299821 CDS
T07453
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ggn03041
]
109299821 (DDX43)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109299821 (DDX43)
Spliceosome [BR:
ggn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109299821 (DDX43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
CMS1
Motif
Other DBs
NCBI-GeneID:
109299821
NCBI-ProteinID:
XP_019375877
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MCQLVDVKHFDNSSIYRRGLGTAVIIEAIPPSALKVAQGAEPLRFRLDSAVVGALIGRGG
AKIRELEDLSGSRIQIIRGEHEAEVKIFGNDVTQNKAKMLIDDLVKRCSQTYPAERTEKA
FFKHQDFSYNDSHESSCDFVKCRNVSQKSVIDWASLRENKARYEAMKWADLPPVEKNFYK
ESLKVASMSREEVENWRKENNDITCDDLKGGEKRYIPNPACKFEDAFKHYPDVMANIRKV
GFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFVHLDSQPIPRHQRDGPGML
VLIPTRELALQVEAECSKYTYKGIKSICIYGGGDRKGQINMVTKGVDIVIATPGRLNDLQ
KNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDIRPDRQTVMTSATWPDGVRRLAKS
YLKDPMIVYVGTLDLTAVNTVEQQVVVIPEEEKRAFTRYFIDTMKPTDKVIIFVGKKLTA
DDLSSDFSLQGIPVQSLHGNREQCDREQALDDFKKGKVRILIATDLASRGLDVHDVTHVF
NFDFPRNIEEYVHRVGRTGRAGRTGEAVTLVTRSDWRIASELIDILERANQAVPEELISM
AERYKQFKLKKEIEKDLGRSQGRSQKRF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtgccagctggtggatgtgaagcattttgacaatagtagtatctacagaagaggacta
ggtactgctgttatcatagaagcaatacctccttctgccctgaaagtggcacaaggcgcg
gagccgctgcgattccgcctggacagcgccgtcgtcggggcgctcataggtcgaggggga
gctaaaataagggaactggaggatttatcaggatcaagaatacagattataaggggagaa
catgaggctgaagtaaagatttttggcaatgatgttacacagaacaaagcaaaaatgttg
attgatgatcttgttaaaaggtgcagccaaacctacccagcagaaagaactgagaaagct
ttcttcaaacatcaggatttcagctataatgattcccatgagagcagttgtgattttgta
aagtgtagaaatgtctcacaaaaatcggtgattgactgggcatctctacgagaaaataaa
gctagatatgaagccatgaagtgggcagatttacctccagttgagaaaaacttctacaaa
gaatcactgaaggttgcttccatgtcacgagaagaagtagagaattggcgaaaagaaaat
aatgatatcacttgtgatgacttgaaaggaggtgaaaagcgctacatccccaatcctgcg
tgtaaatttgaagatgcttttaagcattatcctgatgttatggctaacatcaggaaagtt
ggctttcaaaagcctactccaattcagtcacaagcttggccaatcatacttcaaggaatt
gatctcattggtatagcacagacagggacagggaagacattagcctatttaatgcctgga
tttgttcatctggattcacaaccaattcccagacatcagcgtgatggaccaggtatgttg
gtcctcattcctactcgagagctggctcttcaagtagaggcagaatgttcgaagtataca
tacaaaggaattaagagtatttgcatatatggcggtggggaccgaaaaggacagataaac
atggttacaaaaggtgtggatattgttattgctactcctggtagactgaatgaccttcaa
aagaacaacttcataaatctgaagagcataacatatttggttttggatgaggctgatagg
atgctagatatgggatttgaacctcaaataatgaagatcttaatagacatacgacctgac
agacaaacagtcatgaccagtgctacttggccagatggtgttcgtcgccttgcaaaatcc
tatttgaaagatcccatgattgtatatgttggaactcttgatttgacggcagtaaataca
gtggaacagcaagttgttgttatcccagaagaagaaaagagggcttttacccggtacttc
attgatactatgaagcctacagataaagtcatcatctttgttggaaagaaacttacagct
gatgacttatcaagtgacttcagtctccagggaatacctgttcagtctcttcatggcaac
agagagcagtgtgatcgagaacaagctttggatgacttcaagaaaggaaaagtcagaata
ctgatagctacagatctagcatctcgtggacttgatgtacatgatgttactcacgttttt
aattttgatttcccacggaacattgaagagtatgttcacagagtaggtcgtactggacga
gcaggacgcacaggggaggctgttacacttgtcactaggagtgactggaggattgcatct
gaactgattgacattctggaaagagcaaatcaggcagttccagaagagctcatttcaatg
gcagaaagatataagcaatttaagcttaaaaaagaaattgaaaaggatttgggaagatct
caaggaaggtcccagaagaggttttaa
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