Gavialis gangeticus (Gharial): 109300133
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Entry
109300133 CDS
T07453
Symbol
SOX11
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109300133 (SOX11)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109300133 (SOX11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOA36
Motif
Other DBs
NCBI-GeneID:
109300133
NCBI-ProteinID:
XP_019376262
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MVQQAESPEAESNLPREAMDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSSKPSAGQSPEKNAPPSSGGGGGGSKSAKSSGKKCSKLKPPPASASASASPP
KAGAKAAPHGDYAGEDYVFGGLKVSGKAVKCVFLDEEDEEDEDDDELQLRIKQEADEEDE
EDEQQQQQQLRRYNVAKVPASPTLSSSAESPEGASLYEEVRGGAAHGSGSGSGSNRLYYS
FKNITKQSPPAQPPQPPSLSPASSRSISTSSSGSEEADDLLFDLSLNFSQHPHAGAELGA
GSAAGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaagcggagagtcccgaggcggagagcaacctgccccgggaggcgatggac
accgaagagggcgagttcatggcttgcagcccggtcgccttggacgagagcgacccggac
tggtgcaaaacggcctcggggcacattaagcggcccatgaacgcgtttatggtgtggtcg
aaaatcgagaggagaaaaatcatggagcagtcgccggacatgcacaacgcggagatctcc
aagcgcctgggtaagcggtggaaaatgctgaaggacagcgagaagatcccgttcatccgg
gaggcggagcggctgcggctcaagcacatggccgattaccccgactacaaatacaggccc
aggaaaaagcccaaaatggacccgtcctccaagcccagcgccggccagagcccggagaaa
aacgcgccccccagcagcggcggcggcggcggcggcagcaagagcgccaagagctccggc
aagaaatgcagcaagctcaagcccccgccggcctcggcctcggcctcggcctcgcccccc
aaggccggcgccaaagccgccccgcacggcgactacgcgggggaagactacgtcttcggc
ggcctcaaggtgagcggcaaggcggtcaagtgcgtcttcctggacgaggaggacgaggag
gacgaggacgacgacgagctgcagctgcggatcaagcaggaggcggacgaggaggacgag
gaggacgagcagcagcagcagcagcagctgcggcggtacaacgtggccaaagtgccggcc
agccccaccttgagctcctcggccgagtcccccgagggggcgagcctgtacgaggaggtg
cggggcggcgccgcgcacggcagcggcagcggcagcggcagcaacagactgtactacagc
ttcaagaacatcaccaagcagagccccccggcgcagccgccgcagccgcccagcctgtcg
ccggcctcctcccgctccatctccacctcgtcctccggcagcgaggaggcggacgacctc
ctcttcgacctcagcttgaatttctcccagcacccgcacgccggcgcggagctgggggcg
ggctccgccgcgggcaacctctccctgtccctggtggacaaggatttggattcgttcagc
gagggcagcctgggctcgcacttcgagttccccgattactgcaccccggagctgagcgag
atgatcgcgggggactggctggaggcgaacttttccgacctggtcttcacctactga
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