Gavialis gangeticus (Gharial): 109300147
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Entry
109300147 CDS
T07453
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109300147 (TAF1B)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109300147 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
109300147
NCBI-ProteinID:
XP_019376283
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MDEEDTRDYNEPCVQCSDVNWGLTDEGKFYCKSCHNVIERTKEVLVSDAIPNTKIQSLSK
GLRKRKKIDKGWEWYVCEGFQYILKKQAEALQKLGVCPRMKDEILCSFWRCYLQKSKQAY
CPRPVNDTPLELVVSDSATDVDSEPERVSPFDLSSFTESDIDLQTECSFGQISSVDKTSE
TMFVYSGSIDGSSYVLKRRKGNMRMSMPMTLSFCYMALLWLKEPMTLSDLLRFVAEGHIP
YINAFQYFPEEIKLYGLDLKIFRVESWPEYEDVHNKMLELAAFLDLPRFPAITDSCFLHP
DMLCIKYLMEANLPDELHSWTCRVVKKTGVGETNFLTLDAENKSARKANYDILSVAIIIV
VLKLLLLLNDQYEWVLSNFAEERNKKNKEGRLWFDFRKWYKVVKKSLDIEQKKLAEERAR
CLWKCEKPLFYSAKQKAAILKKRQMILSLQKQFGALTDSPQVTEKQSPSSFQLSWDEENA
DGSCFHGHSLEGFLQEKGDLHRPVNPEYWLCTVKLCNKKICGHLAHYKEGDFSKSYQFIL
NLFSFLLRVDVSLIHEEVCLIEHKLFNARLHKKSKKQSKPKEVEIPKAPGNTG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacacgagagattataacgagccctgtgtacaatgttctgatgtaaac
tggggtcttaccgacgaaggcaaattttattgtaaatcttgtcacaatgttatagagaga
actaaagaggttttagtttctgatgctattcctaataccaagatccagtcactctccaaa
ggattaagaaagaggaaaaaaattgataaaggctgggaatggtatgtttgtgaaggcttt
cagtatatactcaagaagcaagctgaagccctgcaaaaattaggggtgtgcccacggatg
aaggatgaaattctctgcagtttttggagatgttaccttcagaagagcaaacaggcatat
tgccctagaccagttaatgacactcccctggaactggttgtatctgacagtgctactgat
gtggatagtgaaccagagagagttagtccttttgacttgtcatctttcactgaaagtgat
atagatttacagacagaatgcagctttggacagatttcttcagttgacaagacctcagaa
accatgtttgtctactctgggtcgattgatggtagctcgtatgtacttaagaggagaaaa
ggaaacatgaggatgtcaatgccaatgacactttcattctgttatatggcattactgtgg
ctgaaagaaccaatgaccttgtcggatctcttaaggtttgttgctgaaggtcatattcct
tacataaatgcttttcagtattttccagaggagattaaattgtatggacttgatctcaaa
atctttcgtgtggagtcttggcctgagtatgaagatgtacataacaagatgcttgaactt
gcagcatttttagacttgcctcgctttccagctataactgacagctgctttcttcatcca
gacatgttgtgcataaagtatttgatggaagccaacttacctgatgaattgcacagttgg
acttgcagagtggtaaaaaagaccggtgttggagaaacaaactttctgactcttgatgca
gagaataaatcagcaaggaaagcaaattatgatattctttctgtagccatcatcatagtg
gtgctcaagttactgcttttactaaatgatcaatatgaatgggtactttcaaactttgct
gaagaaagaaacaaaaagaacaaagaaggccgcctatggtttgatttcagaaagtggtac
aaggtagtaaagaaatctttggatatagagcaaaagaaattggctgaagagcgtgccagg
tgtctgtggaaatgtgaaaagccactattctactcagctaagcaaaaagctgccatttta
aagaaaagacaaatgatactgagcttacaaaaacagtttggtgcactgacagattcacct
caagttactgaaaagcaaagcccttcaagtttccagttaagctgggatgaagaaaacgca
gatggaagttgttttcatgggcatagcctggagggatttttgcaagaaaaaggcgatttg
catagacccgtgaaccctgaatattggctttgtacagtcaaactatgtaacaaaaagata
tgtgggcatctggcacactataaagaaggagacttttcaaagagctaccagttcatccta
aacctcttctccttccttctaagggtagatgtttcccttatccatgaggaggtgtgtttg
atagaacacaagcttttcaatgcaagacttcataagaagtcaaaaaaacaatccaagccc
aaggaagtggaaattcctaaagctcctggaaatacaggctaa
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