Gavialis gangeticus (Gharial): 109300232
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Entry
109300232 CDS
T07453
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109300232 (HMBOX1)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109300232 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_26
HTH_37
HTH_31
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
109300232
NCBI-ProteinID:
XP_019376432
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MALVRQTKTVRLGLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQ
EHSDKFGRRSGYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTN
QNGRESNERLSAFNGKMSPTRYPLANSLAQRLYSFEASEEDLDIDDKVEELMRRDSSVIK
EEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGA
TLSMRPAPIPVEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDE
AKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGID
VQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTS
HSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtcaggcagacaaagacggtccgtctgggtctgctggaaaccatgtctcac
tacacagatgaacccagatttaccatagagcagatagacctgcttcagcgcctgagacgt
acaggaatgaccagacatgaaatcctccatgccttggaaactttggaccgtcttgatcag
gagcatagtgacaagtttggaagaaggtctggctacggcggcggttcttacagcaacagt
accaacaacgtcccagcatcttcttcgacagccacagcttccacacagacccagcactct
gggatgtccccatcacccagcaacagttacgacacctccccacagccttgcactactaat
cagaacgggagggagagtaatgagcggttgtcggcattcaacgggaagatgtctcccaca
cgctatccgcttgcaaacagcttggctcaaaggttgtacagtttcgaagcatcggaagag
gacctggacatagatgacaaagtagaagaattgatgaggagggacagcagcgtgataaag
gaggaaatcaaagcctttctagccaatcggaggatttcccaagcagttgttgcacaggta
acaggtatcagccagagccggatctcccattggctgttgcagcagggatcagacctgagt
gaacaaaagaaaagggcattttacagatggtaccagcttgagaagacaaaccccggggct
acattaagcatgagacctgctcctatcccagtagaagagccagaatggagacagacacct
cccccagtcacagctacctctgggaccttcagactacggcggggcagtcggttcacatgg
aggaaggagtgcctggctgttatggaaagttacttcaatgagaatcaatatcccgatgag
gcaaagagagaagaaattgcaaacgcctgtaatgcagttatacaaaagccaggcaaaaag
ttgtcagatctggaacgagttacctccctcaaagtgtacaactggtttgccaaccgaaga
aaggaaatcaagagaagagccaatatagaagcagcaatcctggagagccatgggatagat
gtacagagtcctggaggccactccaacagtgacgatgtggacgggaatgactattcagag
caggacacttggcaagtacgcaatggggaggaggagggacgatgttcagagggaggcaga
gaagcagagaaggtagaagaagacaggaggatctgctccaaacaagatgacagcactagc
catagtgaccatcaagaccctatttcattagccgtggaaatggcagcggtaaaccatacc
atcttggcattggcccggcaaggagctaacgagatcaagacagaggctctagacgacgac
tga
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