Gavialis gangeticus (Gharial): 109300519
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Entry
109300519 CDS
T07453
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109300519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109300519
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109300519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
109300519
NCBI-ProteinID:
XP_019376729
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MSQFNFGSSAPGGGFSFGAPKATAASTAAPAAPAPAGFSFSAPGPGTGFSFGIPTPAPAG
AQPAGLFSLPTPATSAPTAGFSFGAPATATPGPAGNVFSLGGNAPKLNLGSSGTTQTTGI
TGGFGLGSSVPSGAPSTQAATPSGFVFGSTTAAATTATTHSGSTGGFNFSTGGATQTGAP
NFSIGPIGSTTQQAMPTGLSFGAIPAAASTAATTAATTQPVTAFTLGVQSAGLNFGMPTS
TPATSAATGTLVPSTSQGPTLSFGAKPGGLTATSTAPIATTATTTPASLLGSSGSILFAS
IASSSAPASSAATGLSLGATSTGTSTLGPLGFGLKVPGTTASAAGSTTSTTSAPSLGFAL
NLKPLTTTGTIGAVTSTATVTTTTTSTPPVMTYAQLESLINKWSLELEDQEKHFLQQATQ
VNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLTPLEESVKEQ
SGTIYLQHADEERERTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADTSDPLQQICKI
LNAHMDSLQWIDQNSALLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttcaacttcgggtcgagcgcgccgggcggcggcttcagcttcggcgccccc
aaggcgacggccgccagcaccgctgcgcccgccgctcccgcccccgccgggttttccttt
tcggcccccggccccgggactggcttcagctttgggatcccgactccggcgccggccggc
gcacagcccgcggggctcttctccctgcccaccccagccacctccgcgccaaccgccggc
ttcagcttcggggcgccggccacggccacgcccggccccgcggggaacgtcttctcactg
gggggaaatgcaccaaagttaaacttgggaagtagtggtacaactcagactacaggaatt
acaggtggctttggacttggtagctctgtaccaagcggtgcaccatctactcaggcagca
actccttctgggtttgtttttggctctactactgctgctgccaccacagctacaacccac
tctgggtcaactggaggttttaacttttccactggaggagcaacccaaactggtgccccc
aacttcagtattggccctataggaagcacgacacagcaagccatgcctacagggttaagc
tttggagcaatcccagctgctgccagcactgcagcaaccacagcagctaccacacagcca
gtgactgccttcacccttggggtacagtctgcaggtttaaattttggaatgccaacatca
acaccagccacttctgcagccacaggaacactggttcctagtactagccagggacccact
ctatcttttggagccaaacctggaggcttgactgcaacatccacagcccctattgccacc
accgccaccaccaccccggcttccctccttggttcatctgggtctatactgtttgcttcc
atagcaagttcttcagcaccagcttcctctgcggctacaggcctttcacttggtgccacc
tcaactggaacatccactcttgggcctcttggatttggtttaaaggtccctggaacaaca
gcttctgcagctggctcaaccacaagtaccacttctgcccctagccttggctttgctttg
aatcttaaaccattgaccaccactggtaccattggtgctgtgacttctactgctactgta
actaccacaaccaccagcactcctccagtgatgacatatgcccagcttgagagtttaatt
aacaaatggagtctagaactggaggaccaagagaagcactttctccagcaggccacacaa
gtcaatgcctgggatcggacactgatagagaatggtgaaaagatcacttcattacacaga
gaagtggagaaagtgaaactggatcagaagaggttggatcaggagctagacttcattctg
tcacaacagaaggagctggaagacttgctgaccccactggaggagtctgtgaaagaacag
agtgggactatctacttgcagcatgcagatgaggagcgggaaagaacctataaattggca
gaaaacatagatgcccagttgaagcgcatggcacaagatcttaaagacatcattgagcac
ctgaacacctctgggggccctgctgacacaagtgacccactccagcagatctgcaaaatt
ttgaatgcacatatggattcattgcagtggattgaccagaactcagccctgctccagagg
aaggtggaggaggtgacaaaggtatgtgaaagtcgccgcaaggagcaggaacgcagtttt
cggatcacttttgattga
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