Gavialis gangeticus (Gharial): 109300617
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Entry
109300617 CDS
T07453
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109300617 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109300617 (CSTF2)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109300617 (CSTF2)
U7-dependent histone pre-mRNA processing factors
109300617 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109300617
NCBI-ProteinID:
XP_019376898
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVPGSGPGPGPGPNAQMNQQTPTSSQPQTIGGMH
VNGAPPLMQPPMQGGVPAPGQMPTSVQGPGPGPGPGPGPGPMAPGGGMQPQVGMPGGGPV
PMERGQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPR
GGTLLSVTGEVEPRGYLGPPHQGPPMHHMPGHDNRGPPHEMRGGPMGEPRPLMGEPRGPL
MDARGGRDPRGMEPRGMEPRGMEPRGMDARGMEPRVMEARGMEARGMEPRAMEPRGPGPN
PRGPMPGGIQGPGPLNMGANVPQGPRQVPNMPGAGMQGGGLPGAGVQGAGQPGGFSPGQN
QVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggcagtgcgggaccccgcggtggaccgctctctgcgctccgtcttcgtg
gggaatatcccatatgaagccacagaggagcagttgaaggacattttctcagaggttgga
cctgttgtcagctttaggctggtatatgacagagagacaggaaagccaaagggttatggc
ttctgtgaataccaagaccaggagacggcgctcagcgccatgcgcaacctgaatggacgt
gagttcagtgggagagcattgcgagtggacaatgcagctagtgagaagaacaaagaagag
ctgaagagcctgggcacaggtgcccccatcatagagtcaccttatggggacccagtaaat
cctgaagatgcccctgagtccatcagcagggcagttgccagcttgccaccagagcagatg
tttgagctgatgaagcaaatgaagttatgtgtccagaacagccctcaggaagcccggaat
atgctgctccaaaaccctcagctggcttatgccctgctgcaagcccaggtggtgatgagg
attgttgatccagagatcgctctgaaaattctgcatcgccagaccagtgttccacctctg
atcccaggcaaccagcagccagttccagggtccgggcctgggcccgggccaggtccaaat
gcacagatgaaccaacagactcccacgtcctcccagccacagaccattggtggtatgcat
gtgaatggagcccctcctctgatgcagcctcctatgcagggtggagtgccagccccagga
cagatgccaacctcagtacagggcccaggccctggccctggccctggccctggccccggc
cccatggctccaggaggtggaatgcagcctcaggtcgggatgccaggtggtggacctgtc
cccatggaacgtggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcc
tctatcgagcgtgttcaagtgcccatgccagatccaagggcccctatgcagcgtggacca
ttgcctgctagtggcccaccaccccgagggcttctgggagatgctccaaatgacccacga
ggagggaccttgctctcagtcactggagaagtggagcccagaggttaccttgggccaccc
caccaggggccacctatgcaccacatgcctggccatgacaaccgtggtccgcctcatgag
atgaggggaggaccaatgggtgaacccagaccactgatgggagaacctcgggggccactg
atggatgctcgaggtggaagagatccccggggcatggagcccaggggcatggaacctcgg
ggaatggagcccaggggcatggatgcaagagggatggagcctcgagtcatggaggccagg
ggcatggaggccagaggcatggagcccagagcgatggaacccaggggccctggccccaat
ccaaggggcccaatgcctggtggcattcaaggccctggaccactgaacatgggagcgaat
gtcccacaggggcctagacaggttcccaacatgccaggggcaggcatgcaaggtggaggc
ctgccaggggcaggggttcaaggagcgggtcaaccaggaggctttagccctgggcaaaac
caagtcacccctcaagatcatgagaaggctgccctgatcatgcaagtcctccagttgact
gcagaccagattgccatgctgcccccagagcaaaggcagagcatccttattctaaaagag
cagatccagaaatccactggggcaccgtga
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