Gavialis gangeticus (Gharial): 109300629
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Entry
109300629 CDS
T07453
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109300629 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggn01009
]
109300629 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109300629 (PCDH11X)
Protein phosphatases and associated proteins [BR:
ggn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109300629 (PCDH11X)
Cell adhesion molecules [BR:
ggn04515
]
Cadherins
Protocadherins
109300629 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Fibulin_C
TMEM154
Cadherin_4
DUF6249
Motif
Other DBs
NCBI-GeneID:
109300629
NCBI-ProteinID:
XP_019376914
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MDLLSGTYLLAVLFACIVYQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENHCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GNPPRSSTAILQVTVTDVNDNRPVFKENYIEVSIPENAPVGTSVSQLHATDADLGSNAQI
LFSFSNQISNLARRLFAIDNTTGLITIKEPLDREESPVHKLTVLASDGSSTPSRATVTIN
ITDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPVIGLSIPENNAPGTQLTKISATDADSGRNAEISYMLGSDAPPIFNLDRRTGILTA
VRKLDREKQDKYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQSSYTFLVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNFSYDLVPTSTNSGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNGSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEVGRPQTPLKETSLEPWTQPQSQRRVTFHLPDGSQESCSDSGLGDHELNSSA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNPPLPSFGFQQGWGQGTRPEGRYTLGRPIPKDDIDKGQGGPRP
QFYNTCERQCTSEDPVKVIPLANFTPAQQAPAGSNTTFIHEHQL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattcgcctgtattgtatatcag
tctggtgctcaggagaagaattatacagtgagggaagaactgccagaaaatgtcctgatt
ggcaatttgctcaaggatctcaacttgacgttggacccagatgttcctctttcatctcct
cttcagtttaagcttgtgtataagactggagatgtaccattagtgcgggtagaggaaaac
actggtgagatattcactactgctaaccgtatagaccgggagaagctgtgctctggaatc
ttcagtgagaaccactgcttttatgaggtggaggtagctgttctgcctgatgaagtcttc
agattagtcaagatcagattcctgatagaggatatcaatgacaatgctcctctctttccc
tcaaccgttattaacatctccatccctgaaaacacagccattaattcccggtattctgtc
ccttctgctattgatcctgacattggagtgaatgggattcaacattatgaacttcttaag
cctaaaacagctccgaaaaggacatttggatccattacgaatgatcagggtcaaaatgta
tttggacttgatataattgaaacacccgagggagacaagtggccacagcttattgtccaa
caaatcctggacagggaacagaaggacacttatgtgatgaagattaaagttgaagatggt
ggcaaccctccaagatcaagtacagctatcctacaagttacagttactgatgtgaatgac
aatcgcccggtctttaaggaaaattatattgaagttagcattccagaaaatgctccagtg
ggcacatcagtttcacagcttcatgccactgatgcagatctgggatcaaatgcacagatc
ctcttctctttcagcaatcaaatctccaatctggccagaaggctgtttgccatagataac
accactggtcttatcacaattaaagagccactagacagagaggaatctcctgtacacaag
ttgactgttttggcaagtgatggcagctcaactccatcaagagcaacagtgacaataaat
atcacagatattaatgacaatgtaccatcaatagacacaaggtacatcattaatccagtg
aatgggactgtgcttttgtctgagaaagccccactcaatacaaaaattgccttgattaca
gtaatggacaaagatgctgacctgaatggaaaggttacttgtttcactgaccatgatgtc
ccatttaggttaaagccagtgtttgacaatcagtttctgctggagacagcgacatttcta
gactatgaggctacccgggaatatgccattaaaatagtggcttctgattcagggaaacct
cccttaaatcagtctgcaatgctcctgattaaaataaaggatgagaatgacaatgccccg
gtttttacacagcctgtaataggactttccattcctgagaacaatgctcctggaacccag
ctgactaagataagtgctacagatgcagacagtggacgcaatgctgagatcagctatatg
ttgggctcagatgcacctcctattttcaacctagaccgccgcacaggcattctgacagca
gtgagaaagctggatagagaaaaacaggacaagtattccttcactgttctagctaaggat
aatgggatgccaccgttgcagaccaatgctacagttacagtgtctgttctggatcagaat
gacaacagccctgccttcacccacaatgaatataatttctatgtgccagaaaatctgccc
atgtatgggacagtggggcttatcacagttactgatgctgactctggagagaatgctgct
gtcactctctctatattaaatggcagagataatttcattattgatccacttactggtgta
ataagaccaaatattacctttgacagggagcaacaaagttcttacactttcctggtgaag
gctgtagatggaggaagactgcaacgttcttcaactgccaaggtgactattaatgtagtc
gatgtgaatgacaacaggcctgtttttgttatcccttcttctaacttctcctatgattta
gttccaacatccaccaattcaggctctgtggtaactaaagtttttgcagttgacaatgac
acagggatgaacgcagaactccgctacagtattataggcgggaactcaagaggtttgttt
acaattgatcagttaacaggcaatatcactttgaaagagaaggtaataacatcagatcat
ggcttacacaggctggtaataaaagtcaatgacttaggacagccagagtcactgtataca
atagcactggtgcatttatttgtgaatgagactgttactaatggttcatatgtgcaagag
cttgtacgcagaaacatggaaacaccagtgggccagaatgttggggatggtgagataacc
ccacagaccaatgactatgtcaagatcatcattgctatcattgcaggcaccatgacagtt
attctggtaatttttgtcactgctttggtacgatgccgccagacacctcggcacaaggtt
gtccaaaaaagcaagcaaagtggggaatgggtctccccaaaccaagagaaccggcagatc
aagaaaaaaaagaagaaaaagaaacgttcccccaaaagtctccttctaaattttgtgaca
attgaagaatctaaacctgatgatcctggccatgagcatataaatggtactttagacatt
cctgtagagttagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaagcctgacagcccagatttagcaaagcactacaagtctgcctctccacagcctacc
tttcaaattaaacctgaaactcctgtgccccctaagaagcaccatgtcattcaggaactg
cctctagataacacctttgtggtgggctgtgattcactctccaaatgctcctcaagcagc
tcggacccttacagtgtctctgaatgcagctgtcaaggaggtttcaagactccaggtccc
atacatactagacagcacacaaaagaagtaggaagaccacaaactcctttaaaagaaaca
agcctggaaccatggacccagccccagtcacagcgccgtgtcacatttcacctgccagac
ggctcccaggaaagctgcagtgacagtgggcttggagaccatgaactcaacagcagtgct
agcacatcacatcctctgccacttggtttcccccaagaggaatactatgaacaggcttca
ccgaacagtcggacagagggagatggcaattcagacccagagtccactattgaagtaaat
ctgcaaaaagccctagctgaagcctctgaaacctgcactcaggagtgtcttattttaggc
cattctgacaactgctggatgccaccttctttgacacagtaccaacaatccaaccctcct
ttgccatcatttggattccagcaaggatggggtcaaggaaccagacctgaaggaagatac
acgcttggcaggcctattcccaaggatgacattgataagggccaaggtgggccaaggccc
cagttctacaatacctgtgaaagacaatgtaccagtgaagatccagttaaggttattccc
ctagcaaacttcactccagcccagcaggcaccagctgggagcaacaccacatttatacat
gagcaccagctataa
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integrated database retrieval system
