Gavialis gangeticus (Gharial): 109300747
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Entry
109300747 CDS
T07453
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04136
Autophagy - other
ggn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109300747 (ATG4A)
04136 Autophagy - other
109300747 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ggn01002
]
109300747 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109300747 (ATG4A)
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109300747 (ATG4A)
Peptidases and inhibitors [BR:
ggn01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
109300747 (ATG4A)
Membrane trafficking [BR:
ggn04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
109300747 (ATG4A)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109300747 (ATG4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
109300747
NCBI-ProteinID:
XP_019377098
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MESDFLEEFPETDEPVWILGKQHHLKADKSKLLLDISARLWFTYRRKFSPIGGTGPSSDA
GWGCMLRCGQMMLAQALICRHLGRDWQWEKHRRQPEEYQKILQCFLDRKDCCYSIHQMAQ
MGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCQSPPQSS
SAAYGSTHSHRSALGRNKNTAGFCSGWKPLLLIIPLRLGINHINPIYIDAFKECFKMPQS
LGALGGKPNNAYYFIGFLGNELIYLDPHTTQIFVDSEENGIVDDQSFHCQQAPHRMKIMN
LDPSVALGFFCKEEKDFDNWCSLVQKEILKQQSLRMFELVQKHPPHWPPFIPPTKPEVTT
TGAELIESTDKLFELEEEFEILSV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagacttcctagaagaatttccagaaacagatgagccagtatggatcttggga
aaacaacaccaccttaaagcagacaaatcaaaattattattggatataagtgctcgtctc
tggtttacatatagaagaaagttttcacctattggaggtactggtccttcatctgatgct
ggctggggatgcatgctgcgatgtgggcagatgatgctggcacaggccttgatctgcagg
catttaggaagggattggcaatgggaaaaacacagaaggcaacctgaagaatatcagaag
atcttgcagtgcttcctagacagaaaagattgctgttattccatccaccagatggcacag
atgggcgtaggagaggggaagtcaattggagaatggtttggaccaaatacagttgcacaa
gtgctaaaaaagcttgctctatttgatgaatggaattccttagcagtttatgtgtccatg
gataacacagtggtcattgaagacatcaagaaaatgtgccagtcccctcctcagagcagc
agtgctgcatatggcagtacgcactcgcacagaagtgctcttggtcgaaacaagaacaca
gcagggttctgctcaggctggaaacccctcttgcttattatacctctacgactggggata
aatcacatcaatccaatttatattgatgcatttaaagaatgttttaagatgccacagtcc
ttgggagcattaggagggaagccaaataatgcctattatttcataggatttttaggtaac
gagctgatctatctggaccctcacaccactcagatttttgtagattcagaggaaaatggc
atcgttgatgaccagagcttccattgtcagcaagccccacatcgaatgaagatcatgaat
ttggatccctctgtagctttaggcttcttttgtaaagaagagaaggacttcgataactgg
tgtagtcttgtacaaaaggagattctaaagcagcagagtctgcggatgtttgagttagtc
cagaagcatccaccacattggcctcctttcatacctccaactaaaccagaagtgacaaca
acaggagcagaactcatagaatctactgacaaactatttgaattggaggaagagtttgag
atcctgagcgtatga
DBGET
integrated database retrieval system
