Gavialis gangeticus (Gharial): 109301008
Help
Entry
109301008 CDS
T07453
Name
(RefSeq) interferon epsilon-like
KO
K05414
interferon alpha
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04060
Cytokine-cytokine receptor interaction
ggn04217
Necroptosis
ggn04620
Toll-like receptor signaling pathway
ggn04621
NOD-like receptor signaling pathway
ggn04622
RIG-I-like receptor signaling pathway
ggn04623
Cytosolic DNA-sensing pathway
ggn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109301008
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109301008
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109301008
04621 NOD-like receptor signaling pathway
109301008
04622 RIG-I-like receptor signaling pathway
109301008
04623 Cytosolic DNA-sensing pathway
109301008
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109301008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ggn04052
]
109301008
Cytokines and neuropeptides [BR:
ggn04052
]
Cytokines
Interferons
109301008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Interferon
AD
SYN8_N
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
109301008
NCBI-ProteinID:
XP_019377411
LinkDB
All DBs
Position
Unknown
AA seq
189 aa
AA seq
DB search
MSTMRLLHICLILLFSTEISSQHCDLLSFQQKKLNKDSLELLEKMGGNFPFQCFNEGIDF
KSMQDVLKLQSSQKENAKLAIQNILQEIFTVFSKNLTQTAWDTISIITFQNKLHQQIERL
EACLGSLKEKDGTKMGSDGLVLTKLKVKRFFQGIYNFLEEKQYSQCAWEIIHMEITRCFL
FVDQLTKSL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtctactatgcgtttgctgcacatttgccttatactgctcttctccactgaaatctca
tcgcagcactgtgatttgcttagcttccagcagaagaaactaaacaaagatagcttagag
ctcctggagaaaatggggggaaattttccctttcaatgcttcaatgaagggattgatttc
aagtccatgcaagatgttctcaagctccaatcatcccagaaagagaatgcaaagttggca
attcagaacatcctccaagagatcttcacagtctttagcaaaaacctcacacaaactgcc
tgggatacgatttccatcattaccttccaaaacaaacttcaccagcaaattgagagactg
gaagcctgtttgggttccctgaaggagaaggatggaaccaagatgggaagtgatggttta
gtgctcaccaagctgaaagtcaaaagatttttccagggaatatacaatttcttggaagag
aagcagtatagccagtgtgcctgggagatcatccacatggaaataaccagatgttttctg
tttgttgaccaactcacaaagagtctttaa
DBGET
integrated database retrieval system