Gavialis gangeticus (Gharial): 109301156
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Entry
109301156 CDS
T07453
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109301156 (PCDH18)
Cell adhesion molecules [BR:
ggn04515
]
Cadherins
Protocadherins
109301156 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
G1_gp67_N
Syndecan
PAH
BBS1
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
109301156
NCBI-ProteinID:
XP_019377640
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MNCKNLQMHQISSKMHFIFLSALMIISFNKDVLGRNLKYRIFEEQRVGSVIARLSEDVAD
VLLKMPNPSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGENSLHT
YSLSANDFFNIEVRSRTDGAKYAELIVVRELDRELKSSYELQLTASDKGVPQRSGSSTLK
ISISDSNDNSPVFEQQSYIIQLLENSPAGTLLIDLNATDPDEGANGKVVYSFSSHVSSKI
IETFKIDSEKGYLTLLKQVDYETTKSYEIDAQAQDLGPNSIPAHCKIIIKIVDVNDNKPE
INLNLMSPEKEEIAYISEGSPLDTFVALVRVQDKDSGMNGEIVCKLHGHGHFKLQKTYEN
NYLILTNATLDREKRSEYSLTVIAEDKGMPSLSTVKHFTVQISDENDNPPRFQTNRYEVV
ILENNSPGAYITSVVATDPDLGDNGQVTYTILESSILGSSITTYVTIDPSNGAIYALRTF
DHEEVNQIAFVVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEVSIPKDA
GSGFLVTRIKAIDRDSGMNSELSCSIAADNENSIFVMDPKSCDIHINVSIESVPSKEWEF
SVIVQDKGSPQLSTKALLKCTVFEYVYSFSSTEAPFVSQPSLDVSMITIISLGSICAVLL
VIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSH
HRASPSSSPTLERGQLSSRQSHHSHQSLNSLVTISSNHVPENFALELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEF
QSQQQLQQQQQQQQQHALEEDSQAADASEKKKSFSTFGKDCQGEEDSGDTCTSSLLSEMS
SVFQRLLPPSLDNYTECNEMDRSNSLERRKGHLASKTVNYPQGVAAWAASTHFQNPANNN
GPTLGTHSSAQPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLL
QDVRQN
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcaagaacttacaaatgcaccaaatcagtagtaaaatgcactttatattcctt
tctgcactgatgataatatctttcaacaaagatgtcttgggcaggaatttgaaatacagg
atctttgaggagcagagagttggatcagtaattgcaagactatcagaggatgtagctgat
gttttattaaaaatgccaaacccttcttcagttcgttttcgagccatgcaaagggggaat
tctcccttacttgtagtccgggaggataatggagagatcagcataggagctaaaattgac
cgggaacaactctgccagaaaaacttaaactgctccatagagtttgatgtgatcactctg
cctactgaacatctgcagcttttccatgttgaagttgaagtgctggatattaatgacaac
tccccccagttttctagagctctcatacctattgaaatttcagagagtgcagctgtagga
acccggatccctttggacagtgcttttgatccagatgttggggaaaattcccttcacact
tactcactgtctgcaaatgatttttttaatattgaagtgcgatcaaggactgatggtgct
aagtatgcagagctcattgtggtaagagaactggatcgggagttgaagtcaagctacgaa
ctccagctcactgcttcagataagggggtgcctcagcgatctggatcatccaccctaaaa
ataagtatttctgactctaatgacaatagtcctgtgtttgaacaacagtcttatataatt
caactcttagaaaattcaccagctggtactttgctcatagacctcaatgctactgatcca
gatgagggcgctaatggtaaagttgtatattcattcagtagtcatgtgtcttccaaaatt
atagagacttttaaaatagattcagaaaaaggatatctgacccttctcaagcaagtggac
tatgaaactaccaaatcctatgaaatagatgcgcaggctcaagatctgggtccaaattct
atcccggctcactgcaaaatcataataaaaattgtggatgttaatgataacaaacctgaa
attaatttaaacttgatgtctcctgagaaagaggaaatagcttacatatcagaagggtca
cctctggacacttttgttgctctagtcagggtacaagacaaggactctggaatgaatgga
gagatagtttgcaagctccatgggcatggccactttaaacttcaaaagacatatgaaaat
aactatttaatcttgactaatgccactctagatagagaaaagagatctgaatacagcttg
actgtaatagcagaagacaagggaatgccaagtctctccacagtaaaacactttactgtc
caaatcagtgatgaaaatgacaacccaccccgcttccagacaaacagatatgaagttgtt
atcttagaaaataattctccaggagcatacatcacatctgtcgtggccacagatccagat
ctaggagacaatggacaggtgacttacactattttggagagctctattttgggaagctcc
ataaccacctatgtgactattgatccatctaatggtgcgatttatgcactcagaactttt
gatcatgaagaagtaaatcagattgcctttgtggttcaagctagagatggaggaagtcag
caacttgttagtaataccactgttgtgttaactatcattgatgaaaatgataatgcccct
gtaattgtgggtcccgccctgcgcaacagtactgcagaagtctcaatccctaaagatgct
ggaagtggcttccttgtcaccaggataaaggccatagatagagactctggtatgaactct
gaactaagttgttctatagcagctgacaatgaaaacagtatttttgtaatggaccccaaa
tcatgtgacatccatatcaatgtcagcatagaatctgttccatctaaggaatgggagttt
tctgtgattgttcaggataaaggcagccctcaacttagcaccaaagcacttctgaaatgt
actgtttttgaatatgtatattcattttcaagtacagaagctccttttgttagccaacct
tccctggatgtctctatgataacaattatatccttaggatcaatatgtgcagtgctgttg
gtcattatggttatctttgctacaagatgcaatcgagagaaaaaggacacgagatcctac
aactgtcgtgtggcagaatccacttaccagcaccacccaaaaagaccctcaagacagata
cacaaaggggacattactcttgtgccaacggtgaatggcactttacccatcaggtctcat
cacagagcttctccttcatcctctccaacattagaaagagggcaactgagcagtcgacag
agccaccatagtcaccaatcactaaacagtctggtgacaatctcatcaaatcatgtgcca
gagaatttcgcactggaactcacccatgctactcctgctgttgagcaggtttctcagctt
ctctcaatgcttcatcaaggccagtatcagccaagaccaagttttagaggaaacaaatat
tccagaagctacagatatgccctacaagatatggacaaatttagcttaaaagacagtggc
cgtggcgatagtgaagcaggagacagtgattatgatttgggaagagagtctccaattgac
agacttcttggggaaggattcagtgaccttttccttactgatgggagaattcctgcagca
atgaggctatgcacagaggaatgccgagttctgggacactctgaccagtgctggatgcca
cctttgccctctccatcttctgattacagaagtaacatgtttattccaggggaggaattt
cagtcacagcaacagctgcagcagcagcagcaacagcagcagcagcatgcactagaagaa
gattcacaggctgcagatgctagtgagaagaaaaagagcttttcaacctttggtaaagat
tgtcagggtgaggaagattcaggggacacatgtacctcatctctcctctctgaaatgagc
agcgtcttccagcgcttgttgcctccttcactggacaactatacagaatgcaatgaaatg
gatcgctcaaattcactagagcgcaggaagggacatttggcatccaagactgtaaattac
ccacaaggggtagcagcatgggcagccagtacacatttccaaaaccctgcaaacaacaat
gggcctactctggggactcactcaagtgcacagccttcttctaaatggcttccagccatg
gaggaaattccagaaaactacgaagaagatgattttgacaacgtgcttaaccacctcaat
gatggtaaacatgaactaatggatgctagtgagctggtagcagaaattaacaagctgctg
caagatgtccggcagaactag
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