Gavialis gangeticus (Gharial): 109301429
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Entry
109301429 CDS
T07453
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109301429 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ggn04812
]
109301429 (CLASP1)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109301429 (CLASP1)
Cytoskeleton proteins [BR:
ggn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109301429 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
HEAT_2
Cnd1
Sec7-like_HUS
PDS5
HEAT_DAAF5
RTP1_C1
ParcG
MMS19_N
MMS19_C
TAN
TPR_20
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
109301429
NCBI-ProteinID:
XP_019378138
LinkDB
All DBs
Position
Unknown
AA seq
1578 aa
AA seq
DB search
MEPTMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGMDILSALVSRLQDRFRAQIGTVLPSLLDRLGDSKDSVREQDQALLLKIME
QAANPQYVWDRLLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQGSGDKN
FDDEDSVDGNRPSSASSSTSSKAPSNSRRVGMGTARRLGSAALGPKSTAAKEGAGAVDEE
DFIKAFDDVPMVQIYSSRDLEESINKIREILSDDKHDWEQRVAALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSILGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLFHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DIDVNAAASAKSKATSSGASTPFSSAAALPPGSYASLDGTTTKPEGRIRTRRQSSGSATS
VTSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSTYGGLTSGASRVPPVP
SSAEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFP
PLASRRHSRSTSALSTAESVGQSDRFGLGQPGRLPASVNAMRVLSTSTDLEAAVADALLL
GDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLN
HCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLV
DFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRF
IVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKA
AQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTNVGSPSNTIGRTPSR
HSSSRTSPLTSPTNCSHGGLSPSRLWGWSADGLSKHPPPLSQPNSIPTAPSHKTFRRSYS
PSLLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGIA
APASDVRGSSDVVEGGRMALDNKTSLLNTQPPRAFSGPRAREYNPYPYSDTINTYDKTAL
KEAVFDDDMDQLRDEVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDNLGVW
EEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSH
KEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQ
LLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKR
AQTTNSNSSSSSDVSTHS
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggagcccactatggagtactgcttagcacaggtgctgcagaaggacgttggcaagaga
cttcaggttggccaagagttgatagattatttctcggataaacagaagtctgctgatctt
gaacacgatcagactatgctggataaaatggtcgatggacttgccacctcttgggtgaat
tccagcaattataaggtggttctgctcgggatggacatcctgtcggcgctggtgtcacga
ctgcaggatcgctttcgagcccagatcggcacagtgctgcccagtttgcttgacaggcta
ggagactcgaaagactcggtgcgggagcaggatcaagcattgctgctaaaaatcatggaa
caagctgctaaccctcagtacgtgtgggacagattgctcggaggattcaaacacaagaat
ttccggacgagagaagggatttgcctctgccttattgccacgctcaacgcatccggagct
cagagtctaactctgagtaagatcgtgccgcatatatgtaacttgcttggagatccaaac
agccaggttcgagatgcagcaataaacagccttgtggaaatttacagacacgtaggcgaa
cgtgtcagggcagatctcagtaaaaaaggattaccacagtctcggttgaacgtcatcttt
acaaaatttgatgaagtccagaaatccggaaacatgatccaggggtcgggcgataaaaat
tttgatgatgaagactctgtggatgggaaccgaccttcctcggccagctcctctacatct
tcaaaggccccttcaaactcccgcagggttgggatggggactgcccgcaggcttgggtct
gcagctctgggcccaaagtccacagcagccaaagagggagctggtgcggtcgatgaggag
gattttattaaagcatttgatgacgtcccaatggtgcagatttattccagccgagacctt
gaagaatccataaacaaaattagagagatattatctgatgataagcatgactgggaacag
agagtggctgctttgaaaaagatccgatccttactattagctggagctgctgaatatgac
aacttcttccaacacctgcgcctgctggatggagcatttaaattgtccgctaaagatctg
cgctctcaggtagtgcgagaggcttgtatcacgttgggacatttgtcatcaattttggga
aacaagtttgaccacggggcagaagccattatgccaaccatctttaatctaattcccaac
agtgccaaagtaatggccacttctggtgttgtagctgttagattaatcatcagacacaca
cacatccctcggctaatacccatcatcaccagcaactgtacctctaagtccgtagcagtt
agaaggcgttgctttgaatttttagacttgctgttacaagaatggcaaacgcactcccta
gaaagacacatatctgtgttagctgaaacgataaagaagggaatccatgacgctgactcc
gaagcaaggatagaggcaaggaagtgttactggggcttccacagtcacttcagcagagaa
gcagaacatttgtttcatacattggaatcctcctatcagaaagccctgcagtctcacctg
aagaactcggacagcatcgtgtcattgcctcagtctgaccgctcctcttccagttcccaa
gagagtctcaaccgccctttgtctgccaaaagaagtcctactgggagcactacatctaga
gcctctacagtaagcacaaaatccgtgtcaacgccaggatctctgcagcgatctcgcagt
gacattgatgtgaacgcggcagccagtgccaagtccaaagcaacgtcttctggagcctcc
acccccttcagctctgctgcagccttgccacctggctcgtatgcatcactagatggtact
accactaaacccgagggtcggattcgcacgaggaggcaaagctccggaagtgccacgagc
gtcacctcaacgcctgccgacacccgaggccgcagccgagctaaagtggtttctcagtcc
cagcgatccagatcagctaatcctgctggtgctggcagccgctccagttctcctggcaag
ctcttgggaagcacctacggtggattgaccagtggagcatccagagtcccaccagtgcca
tcgtccgcagaaaagcgcagcaagatccctcgaagccaaggatgcagccgagagacgagc
cccaacagaataggactagcacggagcagccgtatcccccgacccagcatgagtcagggg
tgcagccgcgataccagccgtgagagcagtcgagatacaagccctgctcggggcttccct
ccgcttgcttctcgacgtcattccagatccactagcgcgctctccactgctgagtctgtt
gggcagtcagaccggtttggccttggacagccaggcaggctgcctgcctccgtgaatgcc
atgcgagtcctgagcacgagcacggatctggaggctgccgtggcggatgcactgctgtta
ggagactccaggagcaagaaaaagccagtgagaagaagatacgagccgtacgggatgtat
tccgatgatgatgctaacagcgacgcatccagcgcttgctccgagcgctcctacggctcc
agaaatggaggcattccccactacctgcggcaaacggaggatgtggctgaggtcctgaac
cactgtgctagttccaactggtcggagagaaaggagggtctcatcggtctccagaactta
ttgaagagccagaggacgctgagccgagtcgagttaaaaaggctgtgtgagatctttact
cgcatgtttgcggatcctcatagcaagagagttttcagcatgtttctagaaaccctggtt
gacttcatcatcatccataaggatgacctgcaagactggctctttgttctcctgacgcag
ctgctcaagaagatgggggcagatttgctgggatctgtgcaggcaaaggtgcagaaagct
ctggatgtgacgagggattcttttccttttgatcagcagtttaacattctgatgcgattt
attgtagatcagacccaaacaccaaacctcaaggtaaaagttgcaatcctgaagtatatt
gagtccttggccagacagatggacccaacagactttgtgaactccagtgagaccagactt
gctgtatcgcgaattataacttggacaacagaaccaaagagctcagatgtgagaaaggca
gcacaaatagtcctgatctccctctttgaactgaacactcctgagtttaccatgttactt
ggtgccttgccgaaaacattccaggacggtgctaccaagctcctgcacaaccacctcaag
aactccagcaacaccaacgtgggctctcccagcaatactatcggtcggaccccttctcgc
cactccagcagcagaaccagccccttgacctcccctactaactgctcccacggaggactg
tctccaagtcggctctggggttggagtgcagacgggctgtcgaagcacccccctcccctt
tctcagcctaactccatccccactgctccttcccacaagactttcagacgctcttactct
cccagcttgctggattatgacacggagaacctaaattccgatgaaatctacagctcactt
cgtggagtcacggaggctattgagaagtttagtttccgtagtcaagaggatctgaatgaa
ccaatcaaacgtgatggaaagaaagactgtgacattgtgtctcgagatggcggaatagct
gctcccgccagcgacgtacgtgggagcagcgacgttgtggaagggggaaggatggctctc
gataacaaaacctctctacttaatacccagcctccacgcgccttttcagggccccgagct
cgagagtacaatccctacccttactcagacacgatcaacacctatgacaagaccgctctg
aaggaggccgtgttcgatgatgatatggatcagcttcgggatgaagtacccattgaccat
tctgatttggtggctgatcttctgaaagaactgtcgaatcacaacgagcgagtggaagaa
cggaaaggagccctgctcgaattactaaagatcacccgagaagataacctgggcgtgtgg
gaggaacatttcaaaaccattttgctgttgctgctagaaaccctgggcgacaaagatcat
tcgataagagccctggccttaagagtattgcgggagatattaaggaatcagccagcaagg
tttaaaaactacgccgaactgaccatcatgaaaacactggaggcacataaggattcccac
aaagaggttgttcgagctgcagaggaagccgcctccaccctggccagttccatccacccg
gagcagtgcatcaaagtgctgtgtcccatcattcaaactgccgactacccgattaattta
gctgccatcaaaatgcagacgaaagtcattgagaggatctcgaaggagtccttacatcag
ctccttcctgatatcattccgggattgttacagggttacgataacacagagagcagcgtt
cgtaaagcaagcgtgttctgcctagtggcgatttactcggtaatcggagaagagctgaaa
ccccaccttgcccagctcacaggaagcaagatgaagctactaaacttgtacataaagagg
gcccagaccaccaatagcaacagcagctcatcgtcagatgtttcaacgcacagttaa
DBGET
integrated database retrieval system
