Gavialis gangeticus (Gharial): 109301461
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Entry
109301461 CDS
T07453
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109301461 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109301461 (XRCC5)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
109301461 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
109301461
NCBI-ProteinID:
XP_019378191
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MARGGSKAAIVLCLDVGFSMSNSAPGEESPFEQAKKVMMKFVRRQVFAESKDEVSVVLFG
TDGTENNLASGDQYRNITVQRHLMLPDFDLLEDIEKEIQPGSQQADFLDALVVCMDLLQN
ETVGKKYDKQHIEVFTDLSSPFSEDLLEVIIANLKKTGISLQFFLPFPVVTDEDESGAMG
DSPRSDTRRSSFPRKGLTEQQKAGIRVVQKLMFALEEEGGLDEIYTFRDSLERLSMFKKI
ERRPMAWPCQLTIGSNLSIRIVAYKSVTEEKVKKSWTAVDAKTLKKDDIQRETVYCLNDD
DETEIQKEDIIQGFRYGSDIVPFSKVDEEQMKYKTEAKCFSVLGFSRSSLIRRHHYMGSQ
VLKVFAAKDDEAAAVAFSALVHALEELDMVAIVRYAYDRRSNPQVGVAFPCIKDAYECLI
YVQLPYMEDIRQYMFASLKNNKKCTPTGEQLSAVDSLIDSMSLVHEDDDGKTFDTFKTSK
IPNPHFQRLYQCLHHKAFHPNEPLPPIEQHLINMLETPREVKERCQTSLEKIKSLFPLKE
AGKKKQQKTAQDIFRDNNGEGPSTTKAEAEDKEDSVSIANLAQGNVTSVGSINPAEDFRV
LVKQKDANFKEVSQQLINRIDQFLESKGWQYYRKSIDCIQVFREEAIKLSEVQRFNDFLQ
ALKGKVEDKGLTDFWEIVIQDEITLITKDEAEGSTVTGEEAKKFLAPKEKPAEAPHLAEE
GGDVDDLLDMM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggcggcagcaaggcagctatagtgctatgtctggatgtaggcttttcaatg
agcaattctgcccctggagaggagtctccgtttgaacaagccaagaaggttatgatgaaa
tttgttcggcgccaggtgttcgccgagagcaaagacgaagtctctgtggttttgtttggt
acagatggtaccgagaataaccttgccagtggggatcagtatcggaacatcactgtgcag
agacacctgatgctcccggattttgatttgctggaggacatagaaaaagagattcaaccg
ggctctcaacaagctgacttcttggatgcgcttgtggtgtgcatggacttgctgcagaat
gaaacagtaggaaagaaatatgacaaacagcacatcgaggtgtttacagacctcagcagt
cccttcagtgaggatcttcttgaggttatcattgccaacttgaagaaaacaggaatctcg
ctacagttcttcttgccatttccagtggtgacggatgaggatgaaagtggggctatgggt
gacagcccacgttctgatacgcgcagaagctcttttccaaggaaaggattaactgagcag
cagaaagcaggtatccgtgtggtgcagaaattgatgtttgctttggaggaagaaggaggc
ctggatgaaatttacactttcagagacagcctggagcgtctttcaatgtttaagaaaatt
gaaagaagacctatggcttggccctgccagctcactataggttctaatctgtccataagg
attgtggcctacaaatcagtcacagaggaaaaggtgaaaaaatcctggacagctgtggat
gccaagaccctgaaaaaagatgatattcaaagagaaactgtttactgtttgaatgatgat
gatgaaacagaaattcagaaagaagacattattcaagggttccgctatgggagtgatata
gttcctttctctaaagtggatgaagagcaaatgaaatacaaaactgaagcaaagtgtttt
tctgttttgggattcagcagatcgtctctgattcggagacatcattatatgggcagccag
gttctaaaggtctttgcagcaaaagatgatgaggctgcagctgttgcgttttctgcccta
gttcatgctttggaggaattggacatggttgccattgtgcgttatgcttatgatagaaga
tcgaatcctcaggttggagtagcttttccatgtatcaaggatgcatatgagtgtcttata
tatgttcagctgccttatatggaagacataagacagtacatgtttgcttccttgaaaaac
aacaagaagtgcactcctacaggtgagcagttgtctgctgtcgactctctgattgattca
atgagtttggtccatgaagatgatgatggcaagacatttgacacatttaaaacaagcaaa
attccaaatcctcactttcagagattgtatcagtgtctgcatcataaggcttttcacccg
aatgagcccttgccacctattgaacagcaccttatcaacatgttggagacccctcgggaa
gtgaaagaaagatgtcagacttctcttgaaaaaataaagtcgcttttccccctaaaggaa
gctggaaagaaaaaacagcagaaaactgcccaagatatcttccgagacaacaacggagag
ggccccagtactacaaaggcagaagctgaagataaagaagacagcgttagcattgcaaac
cttgctcaaggcaatgtcacctccgttggaagtattaacccagcagaagacttccgagtg
ctggtgaagcagaaggatgctaacttcaaggaggtgagccagcagctgataaaccgcatc
gatcagtttttggaaagtaaaggctggcagtattataggaagagcattgattgtatccaa
gttttcagagaggaggccattaagctgtcagaagttcagcgctttaatgatttcctgcag
gccctgaaaggaaaggtggaagataaaggcttaactgatttctgggagattgtgatacaa
gatgaaattactttgatcactaaagatgaagcagaaggaagtacagtgactggggaggaa
gccaaaaagttcttggcccctaaagaaaaaccagcagaagctccccatttggcagaggaa
ggtggcgatgtggatgatttacttgacatgatgtaa
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