Gavialis gangeticus (Gharial): 109301517
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Entry
109301517 CDS
T07453
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109301517
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109301517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
SieB
IQ
FUT8_N_cat
ATP-synt_B
FraC
Lustrin_cystein
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
109301517
NCBI-ProteinID:
XP_019378267
LinkDB
All DBs
Position
Unknown
AA seq
2017 aa
AA seq
DB search
MEPVLVPPGPDSFHFFTRESLAAIEQRIAAEKAKQSKQDRKDDDDENGPKPNSDLEAGKS
LPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EAFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSLLNNTIG
ENDTLVNTTVTEFDWKGYIDDERHFYFLEGQNDALLCGNSSDAGQCPEGYVCVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLIL
AVVAMAYDEQNQATQEEAEQKEAEFQQMLEQLKKQQEAVQQAAAAAAAASAAAESREPSA
EGGLGGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRK
GFRFSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFAD
DEHSTFEDNDSRRDSLFVPRRPGERRNSNISQASRSSRMLAVFPMNGKMHSTVDCNGVVS
LVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMKKRRSNSFNVSMDFLEDPALRER
AMSIASILTNTMEELEESRQKCPPCWYKFANIFLIWDCSPYWLKIKHIVNLIVMDPFVDL
AITICIVLNTLFMAMEHYPMTPEFNHVLSVGNLVFTGIFTAEMFLKIVAMDPYYYFQEGW
NIFDGFIVTLSLIELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKNYKECVCKIAIDCVLPRWHMQDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNL
QIAVARMQKGVDYVKRKVHEFIQKSFVKKQKALDEIKPLEDLNNKKNSCISNHMTAEISK
DHDYLRDGNGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEE
FSSESDLEESKEKLNLSSSSEGSTVDIGVPAEEQPEIEPEEAMEPEACFTEDCVRRFKCC
QVSVEDGRGKQWWSLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTML
EYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAI
KSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK
FYYCVNTTTDERFEVEVINNYSQCRELIDANQSARWKNVKVNFDNVGFGYLSLLQVATFK
GWMDIMYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK
FGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGVVFDFVTQQVFDISIMILIC
LNMVTMMVETDDQSKEMENILQRINLVFIVLFTGECVLKMISLRYYYFTIGWNIFDFVVV
ILSIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAP
ILNSGEPDCDPYRVHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVA
TEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSEFAAALEPPLHLPKPNKVQLIAM
DMPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKASYEPITTTLKR
KQEEVSATIIQRAFRRHLLKQTVKQASFIYNKNKNEGGAGLCIKDEILIDKLNENSFTEK
TDMTTSTAICPPSYDRVTRPVKEKYEHEDKDVQEKKK
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggagccagtgcttgtaccaccaggacctgacagcttccacttcttcactagagagtct
cttgcagctattgaacaacgcattgctgcagaaaaggctaaacagtccaaacaagatcgt
aaagacgacgacgatgaaaatggcccaaagccaaacagtgacttggaggcaggaaagtca
ctcccatttatttatggagacatacctccaggaatggtgtctgagcccttggaggacctg
gacccatactacatcaataaaaaaacttttatagtattgaatagagggaaggcaatcttc
cgattcagtgccacctcagccctttacattttaactcccttcaatcctcttagaaaaata
gctattaaaattttggtacattcattattcagcatgcttattatgtgcaccattttgacc
aactgtgtatttatgaccatgagtaaccccccagattggacaaagaacgtagagtacacc
tttacaggaatatatacatttgaatcacttataaaaattattgcgaggggtttttgttta
gaagcatttactttccttcgagacccatggaactggcttgatttcactgtcattaccttt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagtt
ctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcccta
attcagtctgtgaagaagctctcagatgtaatgatcctcactgtgttttgtctgagtgta
tttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgtttgcagtgg
cctccagaaaattttactttggaaacaaatattacttcactgttaaataacacaataggt
gaaaatgatacgcttgttaataccacagtgactgaatttgactggaaggggtacattgac
gatgaaagacatttttactttctggaagggcagaatgatgctctgctttgtggaaatagc
tcagatgctggtcagtgcccagaaggatatgtgtgtgtaaaagctggtaggaatcccaat
tatggctacacaagctttgacaccttcagctgggcatttttgtctctgtttcgactgatg
actcaagacttctgggaaaacctttatcagctgaccctacgagctgcgggcaaaacatac
atgatattttttgttctggtgattttcctgggctctttctatttgattaacttgatactg
gctgttgttgccatggcctatgatgaacagaatcaagcaacccaagaagaagcagaacag
aaagaggctgaatttcagcagatgcttgagcagctgaaaaagcaacaagaagcagttcag
caggcagcagcggcggcagcagcagcatcagcggcagcagagtcgagagaacctagtgca
gaaggtggactaggaggactctcagaaagttcttctgaagcatcaaagctgagttcaaag
agcgctaaagagaggaggaatagaagaaagaaaaggaagcagaaagagcaatctggagga
gaggagaaagatgaggatgaatttcacaaatctgaatcagaagacagcatcagaaggaaa
ggtttcagattctctattgaagggaacagactgacatatgaaaagaagtattcttctccc
caccagtctttattgagcattcgtggctcccttttttctccaaggcgtaatagcagaaca
agtcttttcagcttcagaggccgagcaaaagatataggatcagaaaatgactttgctgat
gatgaacacagcacttttgaagacaatgacagcagaagagattctctttttgtgccacgt
agacctggtgaacgacgcaacagtaacattagtcaggccagtaggtcatccaggatgctg
gcggtgtttccaatgaatgggaagatgcacagtacagtcgattgcaatggggtggtttcc
ctggttggtggaccatctgttcctacatcgcctgttggacaacttctgccagaggtgata
atagataaaccagctactgatgacaatggcactactacagaaacagaaatgaaaaagaga
agatcaaattcttttaatgtttctatggattttctggaagatccagctttaagagaaaga
gccatgagtatagctagcatacttacaaacactatggaagagcttgaagaatcacgacag
aaatgcccaccgtgctggtacaaatttgcaaacattttcttgatttgggactgcagtcct
tattggttaaaaataaaacatatagtcaatttaattgtgatggacccattcgtcgatctg
gctattactatttgcattgttttaaatacattatttatggccatggaacactatccaatg
acaccagaattcaatcatgtgctttctgttggaaacctggtcttcactgggatcttcaca
gcagaaatgtttctcaagatagttgctatggacccttattattatttccaagaaggctgg
aatatttttgatgggtttattgtaacccttagtttgattgagcttggtcttgcaaatgtg
gaaggactgtccgttcttcgatctttcagattgttacgagttttcaaattggcaaaatca
tggccaacactaaatatgttgataaagatcattggtaactcagtaggagctttggggaat
ttgaccttggtgctcgccatcattgtcttcattttcgctgtggttggtatgcagctattt
ggtaaaaactacaaggaatgtgtctgcaaaatcgcaattgactgtgtacttccacgctgg
cacatgcaagacttcttccactcttttttgattgtgtttcgggttctgtgtggagaatgg
atagagaccatgtgggactgtatggaggttgcaggccaagctatgtgccttactgtcttc
atgatggtcatggtgattggaaacctagtggtattgaacctatttttggctttgctgttg
agttcatttagtgcagataaccttgctgccacagatgatgataatgaaatgaataatctc
cagattgctgtagcaagaatgcagaaaggagtagattatgtgaaaagaaaagtccatgaa
ttcatccaaaaatcttttgttaaaaaacagaaagctttagatgaaatcaaaccacttgaa
gatttaaacaacaagaagaacagctgcatttctaaccacatgacagcagaaataagcaaa
gaccatgattatcttagagatgggaatggaactacgagtggcataggcacaggcagcagt
gtggaaaaatacatcattgatgaaagtgattacatgtcgttcataaacaacccaagtctc
actgtgacggtacccattgctgtcggggagtcagattttgaaaatttaaatacagaagag
tttagcagtgagtcagatctggaagaaagcaaagagaagttaaatttgtccagttcatct
gaaggtagcacagttgatattggagttccagcagaagaacagccagaaattgaacctgaa
gaagccatggagccagaagcctgttttacagaagactgtgtacgaaggtttaaatgctgt
caagtcagtgtagaagatgggagaggaaaacaatggtggagccttaggaaaacatgcttc
aggatagttgaacacaactggtttgagaccttcattgtctttatgattctccttagtagt
ggtgctctggcttttgaagatatatacattgaacagcgcaagacaatcaagactatgctg
gaatatgctgacaaggtcttcacttatattttcattttggaaatgctgctaaaatgggtg
gcctatggttatcaaacatactttactaatgcctggtgttggctggacttcctcattgtt
gatgtttccttggttagcttaacagcaaatgcattgggttactcggaacttggtgccatt
aagtcccttaggaccctaagagctttgagaccactaagagctttgtcacgatttgagggg
atgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctc
gtttgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctgggaag
ttctactactgtgttaacaccacaactgatgaaaggtttgaagtcgaagtaatcaacaat
tatagtcagtgccgggaactcatagacgccaatcaaagtgctcgatggaaaaatgtgaaa
gtaaactttgataatgtaggatttgggtatctatctttacttcaagtagctacatttaaa
ggatggatggacattatgtatgcagctgttgattcaagaaacgtattggaccaacctaag
tatgaagacaacctatacatgtatctttatttcgtcatttttatcatttttgggtcattt
ttcaccctgaatctgttcattggtgtcatcattgataacttcaaccagcaaaaaaagaag
tttggaggtcaagacatctttatgacagaagaacagaagaaatactacaatgcaatgaaa
aaactgggatccaaaaaaccacagaaacctattccacgaccagggaacaagttccaaggt
gtggtctttgattttgtgactcaacaagtatttgatatcagcatcatgattcttatctgc
cttaatatggtcaccatgatggtagaaacagatgatcagagtaaagagatggaaaatatt
ttacagaggattaacctagtgtttattgtcctttttactggagaatgtgtcctgaaaatg
atctcactccgctattactacttcaccataggatggaatatttttgattttgtagttgtc
attctctccatagttggtatgtttctatctgagttgattgaaaaatattttgtgtccccc
accttgttcagagtcatccgactcgccagaataggtcgaatcctgcgactcattaaaggg
gctaaagggatccgcactctgctctttgctttgatgatgtctcttcctgctttgtttaac
attggcctcctgctcttcctggttatgtttatctatgccatatttggaatgtccaacttt
gcctatgttaagagggaagctgggattgatgacatgttcaacttcgaaacttttggcaac
agcatgatctgcctatttcagattaccacatctgctggttgggatggcttgttagcacca
attcttaacagtggggaaccagactgtgacccatatagagttcaccctggaagctctgtt
aaaggagactgtggtaacccttccgttgggattttcttttttgtcagttacattatcata
tcatttctagttgtagtaaacatgtatattgctgtgattttggagaactttggtgttgca
actgaagaaagtgctgaacctttaagtgaggatgactttgagatgttctatgaggtttgg
gaaaagtttgatccagatgcaactcaattcatggaatttgagaagctatctgagtttgca
gctgcacttgagcctcctcttcatttaccaaagcccaacaaagtccagcttattgcaatg
gatatgcccatggttagtggtgacagaattcattgcctggacatcttgtttgcttttaca
aagcgtgttttgggtgaaagtggggagatggatgcacttcgaatacaaatggaagatcgg
tttatggcagccaatccttccaaagcctcctacgaaccaattacaaccacattaaaacgt
aaacaggaagaagtatctgctaccattattcagcgtgctttcagacgtcaccttttaaaa
caaacagtaaaacaggcttcatttatatataacaaaaataaaaatgaaggaggggctggt
ctgtgtattaaagatgaaattctcattgacaagttgaatgaaaactcatttacagagaaa
acagacatgaccacctcaacagctatttgtccaccttcttatgatcgtgtgacaaggcca
gtcaaagaaaaatatgaacatgaagacaaagacgtccaggagaagaaaaagtaa
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integrated database retrieval system
